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■ Abbreviation / Long Form : CPD / computational protein design

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Total Number of Papers: 20
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Abbreviation:   CPD  (>> Co-occurring Abbreviation)
Long Form:   computational protein design
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No. Year Title Co-occurring Abbreviation
2019 Variable Neighborhood Search with Cost Function Networks To Solve Large Computational Protein Design Problems. MC, VNS
2018 A Structural Homology Approach for Computational Protein Design with Flexible Backbone. ---
2018 BBK* (Branch and Bound Over K*): A Provable and Efficient Ensemble-Based Protein Design Algorithm to Optimize Stability and Binding Affinity Over Large Sequence Spaces. MS, SS
2017 Achievements and Challenges in Computational Protein Design. ---
2017 Deterministic Search Methods for Computational Protein Design. CFN, GMEC, ILP, MRF
2017 Multistate Computational Protein Design with Backbone Ensembles. MSD, SSD
2017 Rosetta:MSF: a modular framework for multi-state computational protein design. ---
2017 The Framework of Computational Protein Design. ---
2016 An Atomistic Statistically Effective Energy Function for Computational Protein Design. AUE, SEEF
10  2016 cOSPREY: A Cloud-Based Distributed Algorithm for Large-Scale Computational Protein Design. cOSPREY, GMEC
11  2016 Fast search algorithms for computational protein design. CFN
12  2015 Discriminating between stabilizing and destabilizing protein design mutations via recombination and simulation. ---
13  2015 Guaranteed Discrete Energy Optimization on Large Protein Design Problems. ---
14  2015 Optimization of rotamers prior to template minimization improves stability predictions made by computational protein design. NMR, ROM, WT
15  2014 Pairwise decomposition of an MMGBSA energy function for computational protein design. ---
16  2013 A new framework for computational protein design through cost function network optimization. CFN
17  2012 Multistate approaches in computational protein design. MSD, SSD
18  2011 Computational protein design with a generalized Born solvent model: application to Asparaginyl-tRNA synthetase. AsnRS, AspRS, CASA
19  2009 Protein design in biological networks: from manipulating the input to modifying the output. ---
20  2007 Computational protein design promises to revolutionize protein engineering. ---