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■ Abbreviation / Long Form : EMSA / electrophoretic mobility shift assay

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Abbreviation:   EMSA  (>> Co-occurring Abbreviation)
Long Form:   electrophoretic mobility shift assay
 Abbreviation Variation
 Long Form Variation
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No. Year Title Co-occurring Abbreviation
2020 Chinese medicinal herb extract inhibits PQS-mediated quorum sensing system in Pseudomonas aeruginosa. MHE, PQS, QS
2020 Effect of rosiglitazone on myocardial injury in septic rats through NF-kappaB pathway. ELISA, LDH, mRNA, NF-kappaB, qRT-PCR, SD, TNF-alpha, TUNEL
2020 Electrophoretic Mobility Shift Assays with GFP-Tagged Proteins (GFP-EMSA). ---
2020 Ethanol extract of Elephantopus scaber Linn. Attenuates inflammatory response via the inhibition of NF-kappaB signaling by dampening p65-DNA binding activity in lipopolysaccharide-activated macrophages. ESE, LPS
2020 First Biochemical Steps on Bacterial Transposition Pathways. ---
2020 High CO2/hypoxia-induced softening of persimmon fruit is modulated by DkERF8/16 and DkNAC9 complexes. 1-MCP, BiFC, DEGs, DkXTH9, ERFs, LCI, TFs
2020 Identification of a novel melatonin-binding nuclear receptor: Vitamin D receptor. DBD, LBD, VD3, VDR
2020 Identification of genes regulated by the two-component system response regulator NarP of Actinobacillus pleuropneumoniae via DNA-affinity-purified sequencing. DAP-Seq, RRs, TCS
2020 Interferon regulatory factor 2 plays a positive role in interferon gamma expression in golden pompano, Trachinotus ovatus (Linnaeus 1758). IFN, qRT-PCR
10  2020 l-tetrahydropalmatine suppresses osteoclastogenesis in vivo and in vitro via blocking RANK-TRAF6 interactions and inhibiting NF-kappaB and MAPK pathways. BMMCs, l-THP, RANKL, TRAF6
11  2020 Quantitative Analysis of RNA Chaperone Activity by Native Gel Electrophoresis and Fluorescence Spectroscopy. ---
12  2020 RNA sequencing reveals an additional Crz1-binding motif in promoters of its target genes in the human fungal pathogen Candida albicans. ChIP, MEME
13  2020 Suppression of high-mobility group box 1 ameliorates xerostomia in a sjogren syndrome-triggered mouse model. anti-SSB, AQP5, HMGB1, NF-kappaB, NOD, SS, TLR4
14  2019 1,25-Dihydroxyvitamin D3 affects gastric cancer progression by repressing BMP3 promoter methylation. BGS
15  2019 2'-Hydroxy-5'-methoxyacetophenone attenuates the inflammatory response in LPS-induced BV-2 and RAW264.7 cells via NF-kappaB signaling pathway. 2H5M, COX-2, iNOS, LPS, MAPK, NF-kappaB, NO
16  2019 A Combined ELONA-(RT)qPCR Approach for Characterizing DNA and RNA Aptamers Selected against PCBP-2. ELONA, PCBP-2, SELEX
17  2019 A Functional Polymorphism-Mediated Disruption of EGR1/ADAM10 Pathway Confers the Risk of Sepsis Progression. ChIP, SNPs, TF
18  2019 A functional variant alters binding of activating protein 1 regulating expression of FGF7 gene associated with chronic obstructive pulmonary disease. ChIP-qPCR, COPD, FGF7, GWASs
19  2019 A functional variant rs1537373 in 9p21.3 region is associated with pancreatic cancer risk. e-QTL, LD, PC, SNP
20  2019 A GntR-Like Transcription Factor HypR Regulates Expression of Genes Associated With L-Hydroxyproline Utilization in Streptomyces coelicolor A3(2). L-Hyp
21  2019 A regulatory variant in TBX2 promoter is related to the decreased susceptibility of congenital heart disease in the Han Chinese population. CHD
22  2019 A Simple Method to Detect the Inhibition of Transcription Factor-DNA Binding Due to Protein-Protein Interactions In Vivo. ChIP, TFs
23  2019 Activation of anthrachamycin biosynthesis in Streptomyces chattanoogensis L10 by site-directed mutagenesis of rpoB. NMR, qRT-PCR, YMG
24  2019 Activation of the Transcription of BrGA20ox3 by a BrTCP21 Transcription Factor Is Associated with Gibberellin-Delayed Leaf Senescence in Chinese Flowering Cabbage during Storage. TFs
25  2019 AmrZ and FleQ Co-regulate Cellulose Production in Pseudomonas syringae pv. Tomato DC3000. ---
26  2019 An interdomain bridge influences RNA binding of the human La protein. NRE, RRM2
27  2019 Analysis of Chromatin Binding of Ectopically Expressed Proteins in Early Xenopus Embryos. ChIP
28  2019 Aptamer-peptide conjugates as a new strategy to modulate human alpha-thrombin binding affinity. MD, SPR
29  2019 Association between polymorphism in the promoter region of lncRNA GAS5 and the risk of colorectal cancer. CRC, GAS5, lncRNAs, YY1
30  2019 Beyond a Ribosomal RNA Methyltransferase, the Wider Role of MraW in DNA Methylation, Motility and Colonization in Escherichia coli O157:H7. 5-Aza, DMRs
31  2019 Bioinformatics analysis and transcriptional regulation of TORC1 gene through transcription factors NRF1 and Smad3 in bovine preadipocytes. ---
32  2019 Calcineurin responsive zinc-finger-1 binds to a unique promoter sequence to upregulate neuronal calcium sensor-1, whose interaction with MID-1 increases tolerance to calcium stress in Neurospora crassa. ChIP, CRZ-1, NCS-1
33  2019 Characterization of the copper-sensing transcriptional regulator CopR from the hyperthermophilic archeaon Thermococcus onnurineus NA1. ---
34  2019 Characterization of the human E2F4 promoter region and its response to 12-O-tetradecanoylphorbol-13-acetate. Luc, RB1, TFs, TPA
35  2019 Characterization of the positive SARP family regulator PieR for improving piericidin A1 production in Streptomyces piomogeues var. Hangzhouwanensis. RT-qPCR, SARP
36  2019 CRISPR/cas9 mediated knockout of an intergenic variant rs6927172 identified IL-20RA as a new risk gene for multiple autoimmune diseases. TALE, TNFAIP3
37  2019 Detection of DNA Autoantibodies by Electrophoretic Mobility Shift Assay. DLE, ds, ds, ds, SLE
38  2019 Detection of RNA-protein interactions using a highly sensitive non-radioactive electrophoretic mobility shift assay. ---
39  2019 Dmrt1 directly regulates the transcription of the testis-biased Sox9b gene in Nile tilapia (Oreochromis niloticus). ChIP, CREs, DMRT1
40  2019 DNA binding preferences of S. cerevisiae RNA polymerase I Core Factor reveal a preference for the GC-minor groove and a conserved binding mechanism. CE, CF, CPE, Pol I, rDNA, SL1
41  2019 DNA methylation status of TBX20 in patients with tetralogy of Fallot. BSP, TOF
42  2019 Effects of IL-1beta on MMP-9 Expression in Cementoblast-Derived Cell Line and MMP-Mediated Degradation of Type I Collagen. IL-1beta, MMPs
43  2019 Electrophoretic Mobility Shift Assay and Dimethyl Sulfate Footprinting for Characterization of G-Quadruplexes and G-Quadruplex-Protein Complexes. DMS
44  2019 Enhancer polymorphism rs10865710 associated with traumatic sepsis is a regulator of PPARG gene expression. e-QTL, iMLDR, PPARgamma
45  2019 Evaluation of electrophoretic mobility shift assay as a method to determine plasma protein binding of siRNA. ASO, PPB, siRNA, UF
46  2019 Evaluation of Post-transcriptional Gene Regulation in Pancreatic Cancer Cells: Studying RNA Binding Proteins and Their mRNA Targets. CLIP-PCR, PDAC, RBPs, RNP-IP or RIP
47  2019 Expression and regulation of GnRHR2 gene and testosterone secretion mediated by GnRH2 and GnRHR2 within porcine testes. ChIP, CREB, GnRHR2, SF-1, StAR
48  2019 Expression characterization and transcription regulation analysis of porcine YIPF3 gene. pYIPF3, qPCR
49  2019 Expression, purification and molecular characterization of a novel transcription factor KcCBF3 from Kandelia candel. CRT, DRE, ORF
50  2019 Function and Transcriptional Regulation of Bovine TORC2 Gene in Adipocytes: Roles of C/EBP, XBP1, INSM1 and ZNF263. 5'UTR, cAMP, EdU
51  2019 Functional analysis of two MyoDs revealed their role in the activation of myomixer expression in yellowfin seabream (Acanthopagrus latus) (Hottuyn, 1782). bHLH, MyoD, ORF
52  2019 Functional polymorphisms on chromosome 5p15.33 disturb telomere biology and confer the risk of non-small cell lung cancer in Chinese population. NSCLC
53  2019 Genetic and Functional Variants Analysis of the GATA6 Gene Promoter in Acute Myocardial Infarction. AMI, CAD, DSVs, ECs, LD, SNPs, VSMCs
54  2019 Genome-Wide Identification and Characterization of the AREB/ABF/ABI5 Subfamily Members from Solanum tuberosum. ABA, bZIP
55  2019 GR and Foxa1 promote the transcription of ANGPTL4 in bovine adipocytes. ANGPTL4, LPL, qRT-PCR, TSS
56  2019 Harnessing single-stranded DNA binding protein to explore protein-protein and protein-DNA interactions. ChIP, SSB
57  2019 High glucose upregulates osteopontin expression by FoxO1 activation in macrophages. ChIP, GA, OPN
58  2019 High-Throughput Micro-Characterization of RNA-Protein Interactions. HTP, IP, RBPs
59  2019 Identification of a 1p21 independent functional variant for abdominal obesity. cis-eQTL, DGEA, GWAS, TFMadj, UKB
60  2019 Identification of an Autorepressing Two-Component Signaling System That Modulates Virulence in Streptococcus suis Serotype 2. SS2, TCS09RR, TCSs, WT
61  2019 Identification of Proteins Interacting with Single Nucleotide Polymorphisms (SNPs) by DNA Pull-Down Assay. SNPs
62  2019 Identification of virion-associated transcriptional transactivator (VATT) of SGIV ICP46 promoter and their binding site on promoter. 5'-UTR, DPE, IE, MS, SGIV, TSS, VATT
63  2019 In Vitro Biochemical Assays using Biotin Labels to Study Protein-Nucleic Acid Interactions. ---
64  2019 Increased Expression of MicroRNA 551a by c-Fos Reduces Focal Adhesion Kinase Levels and Blocks Tumorigenesis. ChIP, FAK, miR-551a, UTR
65  2019 Intron polymorphisms of MAGI-1 and ACSF2 and effects on their expression in different goose breeds. qRT-PCR
66  2019 Investigating the impact of local inflammation on granulosa cells and follicular development in women with ovarian endometriosis. GCs, hTERT, NF-kappaB, Q-TRAP, TA, TNF-alpha
67  2019 Investigation of specific binding of designed oligodeoxynucleotide decoys to transcription factors in HT29 cell line undergoing epithelial-mesenchymal transition (EMT). EMT, ODNs
68  2019 IRE1-bZIP60 Pathway Is Required for Nicotiana attenuata Resistance to Fungal Pathogen Alternaria alternata. AOS, BiP, CNX 1-like, CRT, ER, F6'H1, IRE1, LOX3, MeJA, PDI, UPR
69  2019 KSHV lytic proteins K-RTA and K8 bind to cellular and viral chromatin to modulate gene expression. ChIP, ChIP-seq, KSHV
70  2019 Label-Free Electrophoretic Mobility Shift Assay (EMSA) for Measuring Dissociation Constants of Protein-RNA Complexes. Ago2, ITC, PAGE
71  2019 LcNAC13 Physically Interacts with LcR1MYB1 to Coregulate Anthocyanin Biosynthesis-Related Genes during Litchi Fruit Ripening. ---
72  2019 Linagliptin protects rat carotid artery from balloon injury and activates the NRF2 antioxidant pathway. ACS, DPP-4, GSH-Px, HO-1, IL-1beta, Keap1, MDA, NQO1, NRF2, PCI, SOD, TNF-alpha
73  2019 Long Noncoding RNA Lnc-MxA Inhibits Beta Interferon Transcription by Forming RNA-DNA Triplexes at Its Promoter. ChIP, ChIRP, IAV, IRF3, ISG, lncRNAs, RLR, SeV, VSV
74  2019 MdrL, a major facilitator superfamily efflux pump of Listeria monocytogenes involved in tolerance to benzalkonium chloride. BC, MICs
75  2019 MicroRNA hsa-miR-623 directly suppresses MMP1 and attenuates IL-8-induced metastasis in pancreatic cancer. MMP1
76  2019 MiR-454-3p-Mediated Wnt/beta-catenin Signaling Antagonists Suppression Promotes Breast Cancer Metastasis. DKK, miRNAs, RIP, RPRD1A, SFRP
77  2019 Molecular characterization of ABHD5 gene promoter in intramuscular preadipocytes of Qinchuan cattle: Roles of Evi1 and C/EBPalpha. ABHD5, ATGL, EVI1, RACE, TSS
78  2019 Molecular mechanism underlying anti-inflammatory activities of lirioresinol B dimethyl ether through suppression of NF-kappaB and MAPK signaling in in vitro and in vivo models. AP-1, CFA, COX-2, ERK, iNOS, JNK, LPS, MAPKs, MyD88, NF-kappaB, NO, PGE2, TLR
79  2019 Negative regulation of bleomycins biosynthesis by ArsR/SmtB family repressor BlmR in Streptomyces verticillus. MD, RT-qPCR
80  2019 Neuroprotective activity of leukemia inhibitory factor is relayed through myeloid zinc finger-1 in a rat model of stroke. LIF, MZF-1, OGD, SOD3
81  2019 Outer membrane proteins YbjX and PagP co-regulate motility in Escherichia coli via the bacterial chemotaxis pathway. APEC
82  2019 P-element Somatic Inhibitor Protein Binding a Target Sequence in dsx Pre-mRNA Conserved in Bombyx mori and Spodoptera litura. CD, ITC, PSI
83  2019 P7 and P8 proteins of High Plains wheat mosaic virus, a negative-strand RNA virus, employ distinct mechanisms of RNA silencing suppression. ---
84  2019 Pectic polysaccharides extracted from Rauvolfia verticillata (Lour.) Baill. var. hainanensis Tsiang ameliorate ulcerative colitis via regulating the MAPKs and NF-kappaB pathways in dendritic cells. DAI, DCs, DSS, ELISA, ERK, IL-6, JNK, MAPKs, NF-kappaB, PP, RT-PCR, SASP, TNF-alpha, UC
85  2019 PgMYB2, a MeJA-Responsive Transcription Factor, Positively Regulates the Dammarenediol Synthase Gene Expression in Panax Ginseng. DDS, MeJA
86  2019 PPR Protein BFA2 Is Essential for the Accumulation of the atpH/F Transcript in Chloroplasts. PPR
87  2019 Rapid and efficient purification of Drosophila homeodomain transcription factors for biophysical characterization. Abd-A, Abd-B, Antp, Ftz, HD TFs, NMR, Ubx
88  2019 Rare non-coding Desmoglein-2 variant contributes to Arrhythmogenic right ventricular cardiomyopathy. AP-1, ARVC, DSG2
89  2019 Regulation and Control of AP-1 Binding Activity in Embryotoxicity. ---
90  2019 Regulation of antimonite oxidation and resistance by the phosphate regulator PhoB in Agrobacterium tumefaciens GW4. ---
91  2019 Regulation of differential proton-coupled folate transporter gene expression in human tumors: transactivation by KLF15 with NRF-1 and the role of Sp1. hPCFT, NE
92  2019 Role of NF-kappaB in cytochrome P450 epoxygenases down-regulation during an inflammatory process in astrocytes. EETs
93  2019 Serotype-shifting gene rfbT is a direct transcriptional target of cAMP receptor protein (CRP) in V.cholerae O1. CBS, CRP, WT
94  2019 Smad3 influences Smad2 expression via the transcription factor C/EBPalpha and C/EBPbeta during bovine myoblast differentiation. TGF-beta
95  2019 SmGRAS1 and SmGRAS2 Regulate the Biosynthesis of Tanshinones and Phenolic Acids in Salvia miltiorrhiza. ---
96  2019 SNP located in an AluJb repeat downstream of TMCO1, rs4657473, is protective for POAG in African Americans. AA, POAAGG, POAG, SNPs, TBX5
97  2019 Sox7 negatively regulates prostate-specific membrane antigen (PSMA) expression through PSMA-enhancer. ChIP, PSMA, PSME
98  2019 Sympathetic Regulation of Slc2a4 Gene Expression: Participation of a Putative cAMP Responsive Element (CRE) Site in the Slc2a4 Promoter. ChIP, CRE, CREB
99  2019 TaCAMTA4, a Calmodulin-Interacting Protein, Involved in Defense Response of Wheat to Puccinia triticina. BiFC, CaM, VIGS
100  2019 TCP transcription factor PpTCP20 is involved in peach bud endodormancy by inhibiting PpDAM5/PpDAM6 and interacting with PpABF2. ABA, Dual-LUC