fragments per kilobase of transcript per million fragments mapped (FPKM) - Allie: Abbreviation / Long Form Info.

■ Abbreviation / Long Form : FPKM / fragments per kilobase of transcript per million fragments mapped

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Total Number of Papers: 35

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Abbreviation:	FPKM (>> Co-occurring Abbreviation)
Long Form:	fragments per kilobase of transcript per million fragments mapped

Abbreviation Variation

Long Form Variation

fragments per kilobase of transcript per million fragments mapped (4 times)

fragments per kilobase million (3 times)

fragments per kilobase per million fragments (3 times)

fragments per kilobase of exon per million fragments mapped (3 times)

Fragments Per Kilobase of transcript per Million fragments mapped (3 times)

fragments per kilobase of exon model per million mapped reads (2 times)

fragments per kilobase of exon per million mapped sequence reads (1 time)

Fragments Per Kilobase per Million mapped reads (1 time)

Fragments Per Kilo-base of exon per Million mapped fragments (1 time)

fragments per kilobase of transcript per million fragments sequenced (1 time)

fragments per kilobase of transcript per millions fragments sequenced (1 time)

fragments per kilo base of transcript per million reads mapped (1 time)

fragments per kilobase per million mapped fragments (1 time)

fragments per kb per million fragments (1 time)

fragments per kilobase of exon per million fragments (1 time)

Fragments per kilobase of exon per million fragments mapped (1 time)

fragments per kilobase of exon per millionfragments mapped (1 time)

fragments per kilobase per million reads (1 time)

fragments per kilobases per million reads (1 time)

fragments per kilobase of exon per million mapped reads (1 time)

fragments per kilo base per million (1 time)

Fragments per Kilobase per Million mapped reads (1 time)

fragments per kilobase of exon model per million reads mapped (1 time)

Pair(Abbreviation/Long Form) Variation

			FPKM / fragments per kilobase of transcript per million fragments mapped (4 times)
			FPKM / fragments per kilobase of exon per million fragments mapped (3 times)
			FPKM / Fragments Per Kilobase of transcript per Million fragments mapped (3 times)
			FPKM / fragments per kilobase million (3 times)
			FPKM / fragments per kilobase per million fragments (3 times)
			FPKM / fragments per kilobase of exon model per million mapped reads (2 times)
			FPKM / fragments per kilobase of exon per million fragments (1 time)
			FPKM / Fragments per kilobase of exon per million fragments mapped (1 time)
			FPKM / fragments per kilobase of exon per millionfragments mapped (1 time)
			FPKM / fragments per kilobase per million reads (1 time)
			FPKM / fragments per kilobases per million reads (1 time)
			FPKM / fragments per kilobase of exon per million mapped reads (1 time)
			FPKM / fragments per kilo base per million (1 time)
			FPKM / Fragments per Kilobase per Million mapped reads (1 time)
			FPKM / fragments per kb per million fragments (1 time)
			FPKM / fragments per kilobase of transcript per millions fragments sequenced (1 time)
			FPKM / fragments per kilobase of transcript per million fragments sequenced (1 time)
			FPKM / fragments per kilobase per million mapped fragments (1 time)
			FPKM / fragments per kilobase of exon per million mapped sequence reads (1 time)
			FPKM / Fragments Per Kilobase per Million mapped reads (1 time)
			FPKM / Fragments Per Kilo-base of exon per Million mapped fragments (1 time)
			FPKM / fragments per kilo base of transcript per million reads mapped (1 time)
			FPKM / fragments per kilobase of exon model per million reads mapped (1 time)

No.	Year	Title	Co-occurring Abbreviation
1	2020	Co-Expression Network Analysis of Spleen Transcriptome in Rock Bream (Oplegnathus fasciatus) Naturally Infected with Rock Bream Iridovirus (RBIV).	MM, PRPF19, RBIV
2	2020	De novo assembly, transcriptome characterization, and simple sequence repeat marker development in duckweed Lemna gibba.	SSRs
3	2020	Determination of reference genes for ovine pulmonary adenocarcinoma infected lung tissues using RNA-seq transcriptome profiling.	OPA, RT-qPCR, SEM
4	2020	Different transcriptome profiles between human retinoblastoma Y79 cells and an etoposide-resistant subline reveal a chemoresistance mechanism.	CCK-8, DEGs, KEGG, Rb, RNA-Seq
5	2020	Genome-wide identification and expression analyses of Sm genes reveal their involvement in early somatic embryogenesis in Dimocarpus longan Lour.	AS, EC, KT, NEC, SE
6	2020	Identification and phylogenetics of Spodoptera frugiperda chemosensory proteins based on antennal transcriptome data.	CSPs, DGE, IRs, OBPs, ORs, SNMPs
7	2020	Identification and preliminary characterization of chemosensory-related proteins in the gall fly, Procecidochares utilis by transcriptomic analysis.	CSPs, DEGs, GRs, IRs, OBPs, ORs, qRT-PCR, SNMPs
8	2020	RNA sequencing of CD4 T-cells reveals the relationships between lncRNA-mRNA co-expression in elite controller vs. HIV-positive infected patients.	DE, ECs, FDR, HCs, HPs, lncRNAs
9	2020	TEnGExA: an R package based tool for tissue enrichment and gene expression analysis.	TEA
10	2020	The Differential Expression of Long Noncoding RNAs in Type 2 Diabetes Mellitus and Latent Autoimmune Diabetes in Adults.	LADA, lncRNAs, mRNAs, T2DM
11	2020	Transcriptome analysis of fungicide-responsive gene expression profiles in two Penicillium italicum strains with different response to the sterol demethylation inhibitor (DMI) fungicide prochloraz.	ABC, CaMK, DEGs, DMI, ERG, MAPK, MFS, qRT-PCR
12	2020	Transcriptomic response to cold of thermophilous medicinal plant Marsdenia tenacissima.	DEGs
13	2019	A Six-Gene Signature Predicts Survival of Adenocarcinoma Type of Non-Small-Cell Lung Cancer Patients: A Comprehensive Study Based on Integrated Analysis and Weighted Gene Coexpression Network.	AIC, AUC, DEGs, GEO, LUAD, NSCLC, WGCN
14	2019	Sex- and tissue-specific transcriptome analyses and expression profiling of olfactory-related genes in Ceracris nigricornis Walker (Orthoptera: Acrididae).	CSPs, DEGs, IRs, OBPs, ORs, qRT-PCR, SNMPs
15	2019	Transcriptome Analysis to Identify Human Spermatogonial Cells from Sertoli Cell-Only Testes.	NGS, OA, SCO
16	2018	Melonet-DB, a Grand RNA-Seq Gene Expression Atlas in Melon (Cucumis melo L.).	NAC, NOR, RIN
17	2018	Transcriptome analysis in the beet webworm, Spoladea recurvalis (Lepidoptera: Crambidae).	BLASTX, COG, KEGG
18	2018	Transcriptome sequencing and de novo assembly in arecanut, Areca catechu L elucidates the secondary metabolite pathway genes.	GO
19	2018	Transcriptomics reveal the molecular underpinnings of chemosensory proteins in Chlorops oryzae.	DEGs, GRs, IRs, OBPs, ORs, qRT-PCR, SNMPs
20	2017	Antennal transcriptome analysis of the piercing moth Oraesia emarginata (Lepidoptera: Noctuidae).	ORs, PBPs, PRs, RT-qPCR
21	2017	Comparative venom gland transcriptomics of Naja kaouthia (monocled cobra) from Malaysia and Thailand: elucidating geographical venom variation and insights into sequence novelty.	AChE, AP, HYA, LAAO, NGS, NK-M, PLB, SVSP
22	2017	Fast bootstrapping-based estimation of confidence intervals of expression levels and differential expression from RNA-Seq data.	GUI, TPM
23	2017	High Quality Unigenes and Microsatellite Markers from Tissue Specific Transcriptome and Development of a Database in Clusterbean (Cyamopsis tetragonoloba, L. Taub).	GO, HQ, NCBI, PIC, SSRs
24	2017	Identification and characterization of long intergenic noncoding RNAs in bovine mammary glands.	ALDB, lincRNAs, QTL, UITs
25	2017	Two Cycloartenol Synthases for Phytosterol Biosynthesis in Polygala tenuifolia Willd.	DEUG, MeJA, OSCs
26	2016	Analysis of ethanol fermentation mechanism of ethanol producing white-rot fungus Phlebia sp. MG-60 by RNA-seq.	---
27	2016	Comprehensive Analysis of the Triterpenoid Saponins Biosynthetic Pathway in Anemone flaccida by Transcriptome and Proteome Profiling.	CYP450, MEP, MVA
28	2015	Expression profile analysis of long non-coding RNA associated with vincristine resistance in colon cancer cells by next-generation sequencing.	lncRNAs, VCR
29	2015	Genome-wide analysis and differential expression of chitinases in banana against root lesion nematode (Pratylenchus coffeae) and eumusa leaf spot (Mycosphaerella eumusae) pathogens.	CIs
30	2015	Identification and Comparative Expression Profiles of Chemoreception Genes Revealed from Major Chemoreception Organs of the Rice Leaf Folder, Cnaphalocrocis medinalis (Lepidoptera: Pyralidae).	CSPs, IRs, OBPs, ORs, RT-qPCR, SNMPs
31	2015	Identification of core miRNA based on small RNA-seq and RNA-seq for colorectal cancer by bioinformatics.	CRC, GEO, miRNA
32	2014	Identification of mutant genes with high-frequency, high-risk, and high-expression in lung adenocarcinoma.	CCNC, CDS, COSMIC, DUSP, GO, MDH, RBM, SNV, STAT2, TF, TRIP
33	2014	Transcriptome sequencing of rhizome tissue of Sinopodophyllum hexandrum at two temperatures.	---
34	2013	Cryopreserved bovine spermatozoal transcript profile as revealed by high-throughput ribonucleic acid sequencing.	---
35	2013	De novo transcriptome analysis using 454 pyrosequencing of the Himalayan Mayapple, Podophyllum hexandrum.	KAAS, KEGG