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■ Abbreviation / Long Form : GSEA / gene set enrichment analysis

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Total Number of Papers: 780
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Abbreviation:   GSEA  (>> Co-occurring Abbreviation)
Long Form:   gene set enrichment analysis
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No. Year Title Co-occurring Abbreviation
2019 A gene expression signature-based nomogram model in prediction of breast cancer bone metastases. BCBM, GESBN, SREs
2019 A novel 4-gene signature for overall survival prediction in lung adenocarcinoma patients with lymph node metastasis. GEO, LNM, LUAD, t-ROC
2019 A preliminary investigation of circulating extracellular vesicles and biomarker discovery associated with treatment response in head and neck squamous cell carcinoma. AV, CRT, CTB, EVs, HNSCC, STRING
2019 Aberrant expression of CHL1 gene and long non-coding RNA CHL1-AS1, CHL1-AS2 in ovarian endometriosis. EC, EM, EU, IHC, lncRNAs, NE, qPCR
2019 Aberrant FAM64A mRNA expression is an independent predictor of poor survival in pancreatic cancer. OS, RFS, ROC
2019 Aberrant transcriptomes and DNA methylomes define pathways that drive pathogenesis and loss of brain laterality/asymmetry in schizophrenia and bipolar disorder. BD, DNAm, SCZ
2019 ADAM17 promotes lymph node metastasis in gastric cancer via activation of the Notch and Wnt signaling pathways. ADAMs
2019 ARNTL hypermethylation promotes tumorigenesis and inhibits cisplatin sensitivity by activating CDK5 transcription in nasopharyngeal carcinoma. ARNTL, Cdk5, NPC
2019 Bioinformatics profiling utilized a nine immune-related long noncoding RNA signature as a prognostic target for pancreatic cancer. AUC, lncRNA, OS, PCA, ROC curve
10  2019 Cancer genetic markers according to radiotherapeutic response in patients with primary glioblastoma - Radiogenomic approach for precision medicine. GB, PD, RANO, RT
11  2019 Characterization of lncRNA-miRNA-mRNA Network to Reveal Potential Functional ceRNAs in Bovine Skeletal Muscle. GO
12  2019 Clinically Relevant Biomarker Discovery in High-Risk Recurrent Neuroblastoma. LASSO, lncRNAs, PcG, PLS-DA
13  2019 Co-expression network analysis identified KIF2C in association with progression and prognosis in lung adenocarcinoma. LUAD, NSCLC
14  2019 Co-expression Network Analysis Identifies Four Hub Genes Associated With Prognosis in Soft Tissue Sarcoma. ME, STS, WGCNA
15  2019 Combining data from TCGA and GEO databases and reverse transcription quantitative PCR validation to identify gene prognostic markers in lung cancer. CLIC3, RRM2, STRING, TPBG, WIF1
16  2019 Connectivity map identifies luteolin as a treatment option of ischemic stroke by inhibiting MMP9 and activation of the PI3K/Akt signaling pathway. CMap, HBMECs, MCAO, MMP9, qRT-PCR
17  2019 Construction of immune-related risk signature for renal papillary cell carcinoma. ImmPort, KIRP
18  2019 Decreased expression of STAT5A predicts poor prognosis in osteosarcoma. EFS, OS, STAT5
19  2019 Detection of Exosomal PD-L1 RNA in Saliva of Patients With Periodontitis. PD-L1
20  2019 ebGSEA: An improved Gene Set Enrichment Analysis method for Epigenome-Wide-Association Studies. ---
21  2019 ERR1 and PGC1alpha associated mitochondrial alterations correlate with pan-cancer disparity in African Americans. AA, EA, TMA
22  2019 Estrogen receptor beta enhances chemotherapy response of GBM cells by down regulating DNA damage response pathways. ERbeta, GBM, HR, TMZ
23  2019 Exportin-T promotes tumor proliferation and invasion in hepatocellular carcinoma. ANLT, CCK-8, CCNA1, CCNB1, CCNB2, CCNE2, CDK1, CDK2, CDK4, HCC, si
24  2019 Expression of the Wnt ligands gene family and its relationship to prognosis in hepatocellular carcinoma. DFS, OS, OS
25  2019 Five-long non-coding RNA risk score system for the effective prediction of gastric cancer patient survival. DE-RNAs, GC, ITPK1-AS1, KCNQ1DN, lncRNAs, WGCNA
26  2019 Gene amplification derived a cancer-testis long noncoding RNA PCAT6 regulates cell proliferation and migration in hepatocellular carcinoma. CT, CT-lncRNA, LIHC, lncRNAs
27  2019 Gene expression patterns in synchronized islet populations. ---
28  2019 Genetic variants and Expression of Cytochrome p450 Oxidoreductase Predict Postoperative Survival in Patients with Hepatitis B Virus-Related Hepatocellular Carcinoma. CI, HBV, HCC, HR, OS, RFS, SNPs
29  2019 Genomic Drivers of Poor Prognosis and Enzalutamide Resistance in Metastatic Castration-resistant Prostate Cancer. mCRPC, OS, WGS
30  2019 HAMP Downregulation Contributes to Aggressive Hepatocellular Carcinoma via Mechanism Mediated by Cyclin4-Dependent Kinase-1/STAT3 Pathway. EdU, HCC
31  2019 High expression of MUC20 drives tumorigenesis and predicts poor survival in endometrial cancer. EC, MUCs, ROS
32  2019 Hsa-miR-889-3p promotes the proliferation of osteosarcoma through inhibiting myeloid cell nuclear differentiation antigen expression. miRNA, MNDA
33  2019 Identification of a 5‑microRNA signature and hub miRNA‑mRNA interactions associated with pancreatic cancer. AUC, BP, DAVID, DEMs, GEO, GO, KEGG, LASSO, NCBI, PC, WGCNA
34  2019 Identification of a novel cell cycle-related gene signature predicting survival in patients with gastric cancer. GC, mRNA, OS
35  2019 Identification of biomarkers associated with the recurrence of osteosarcoma using ceRNA regulatory network analysis. ATF2, ce, GEO, lnc, mi, PPM1B, RAP1B, SNHG1
36  2019 Identification of Key circRNAs/lncRNAs/miRNAs/mRNAs and Pathways in Preeclampsia Using Bioinformatics Analysis. GO, LIF, PE
37  2019 Identification of key genes and pathways involved in microsatellite instability in colorectal cancer. CRC, DEGs, GO, MSI, MSS, RPL12, WGCNA, ZNF
38  2019 Identification of key pathways and hub genes in basal-like breast cancer using bioinformatics analysis. BC, BLBC, DEGs, PPI
39  2019 Identification of marker genes and pathways specific to precancerous duodenal adenomas and early stage adenocarcinomas. ---
40  2019 Identification of miR-375 as a potential prognostic biomarker for esophageal squamous cell cancer: A bioinformatics analysis based on TCGA and meta-analysis. ANET, ESCC
41  2019 Identification of pathological grade and prognosis-associated lncRNA for ovarian cancer. GO, lncRNA, OC, PHR
42  2019 Identification of Prognostic Alternative Splicing Signature in Breast Carcinoma. AS, AUC, BrCa, DCA, OS, PSI, ROC, SF
43  2019 Identification of seven long noncoding RNAs signature for prediction of biochemical recurrence in prostate cancer. BCR, lncRNAs, PCa
44  2019 Identifying psychiatric disorder-associated gut microbiota using microbiota-related gene set enrichment analysis. ADHD, AUT, BD, GWAS, MDD, SCZ
45  2019 Iguratimod represses B cell terminal differentiation linked with the inhibition of PKC/EGR1 axis. ASC, Egr-1, EIA, PKC, RA, TFs
46  2019 Integrated analysis of the prognostic value of TP53 dependent etoposide-induced gene 24 in non-small cell lung cancer. Ei24, NSCLC
47  2019 Integrated profiling identifies caveolae-associated protein 1 as a prognostic biomarker of malignancy in glioblastoma patients. CAVIN1, CGGA, GBM, GEO, GO, GSVA, ROC
48  2019 Integrative analysis of genome-wide association study and chromosomal enhancer maps identified brain region related pathways associated with ADHD. ADHD, GWAS
49  2019 Integrative analysis of KIF4A, 9, 18A, and 23 and their clinical significance in low-grade glioma and glioblastoma. GBM, KIF, LGG
50  2019 Investigations on the mechanism of progesterone in inhibiting endometrial cancer cell cycle and viability via regulation of long noncoding RNA NEAT1/microRNA-146b-5p mediated Wnt/beta-catenin signaling. HMDD, LEF1, NEAT1, RT-PCR
51  2019 KLF5 and MYC modulated LINC00346 contributes to gastric cancer progression through acting as a competing endogeous RNA and indicates poor outcome. Ago2, GC, GEO
52  2019 LncRNA MIR4435-2HG predicts poor prognosis in patients with colorectal cancer. OS
53  2019 Long non-coding RNA HOTAIR promotes exosome secretion by regulating RAB35 and SNAP23 in hepatocellular carcinoma. CD63, HCC, lncRNAs, mTOR, MVBs, SNAP23, VAMP3
54  2019 Loss of miR-146b-5p promotes T cell acute lymphoblastic leukemia migration and invasion via the IL-17A pathway. IL-17A, IL-17RA, miRNAs, MMP9, NF-kappaB, qPCR, T-ALL
55  2019 Lysophosphatidic Acid Receptor 6 (LPAR6) Expression and Prospective Signaling Pathway Analysis in Breast Cancer. BC, LPA, LPAR6, LPAR6, qRT-PCR
56  2019 Mapping Bromodomains in breast cancer and association with clinical outcome. BRD, OS, RFS
57  2019 MGSEA - a multivariate Gene set enrichment analysis. EMT, GBM, METABRIC, MGSEA, REMBRANDT
58  2019 MicroRNA-140-5p targeting tumor necrosis factor-alpha prevents pulmonary arterial hypertension. 3'-UTR, ELISA, GEO, HE, LV, MCT, PAH, PASMCs, RV, RVSP, TNF-alpha
59  2019 Mixtures of Aluminum and Indium Induce More than Additive Phenotypic and Toxicogenomic Responses in Daphnia magna. ---
60  2019 Multiple-microarray analysis for identification of hub genes involved in tubulointerstial injury in diabetic nephropathy. DEGs, DN, GEO, GO, KEGG
61  2019 Overexpression of oncostatin M receptor regulates local immune response in glioblastoma. CGGA, GBM, GEO, MCP-counter, OSMR
62  2019 Overexpression of PARPBP Correlates with Tumor Progression and Poor Prognosis in Hepatocellular Carcinoma. HCC, HR, OS, RFS
63  2019 Paternal high-fat diet transgenerationally impacts hepatic immunometabolism. G0S2, HFD
64  2019 Pathway enrichment analysis and visualization of omics data using g:Profiler, GSEA, Cytoscape and EnrichmentMap. ---
65  2019 Pathway enrichment analysis approach based on topological structure and updated annotation of pathway. CePa, CRAN, DAVID, SPIA, TPEA
66  2019 Polo-like kinase 3 is associated with poor prognosis and regulates proliferation and metastasis in prostate cancer. PCa, Plks
67  2019 Prognostic value and oncogene function of heterogeneous nuclear ribonucleoprotein A1 overexpression in HBV-related hepatocellular carcinoma. HCC, hnRNP A1
68  2019 SREBP1, targeted by miR-18a-5p, modulates epithelial-mesenchymal transition in breast cancer via forming a co-repressor complex with Snail and HDAC1/2. EMT, SREBP1
69  2019 SUMO protease SENP1 acts as a ceRNA for TGFBR2 and thus activates TGFBR2/Smad signaling responsible for LPS-induced sepsis. HUVECs
70  2019 Systems biology based meth-miRNA-mRNA regulatory network identifies metabolic imbalance and hyperactive cell cycle signaling involved in hepatocellular carcinoma onset and progression. HCC, meth-miRNA-mRNA, miRNA
71  2019 Telmisartan Protects a Microglia Cell Line from LPS Injury Beyond AT1 Receptor Blockade or PPARgamma Activation. ARB, PPARgamma
72  2019 The Identification of Potential Biomarkers and Biological Pathways in Prostate Cancer. BCR, DEGs, GO, KEGG, PCa, PPI
73  2019 The role of DOCK10 in the regulation of the transcriptome and aging. Dox, GEF, GEPs, IL-4, KO, SBC, WT
74  2019 Transcriptional positive cofactor 4 promotes breast cancer proliferation and metastasis through c-Myc mediated Warburg effect. EMT, PC4
75  2019 Transcriptome-based identification of lovastatin as a breast cancer stem cell-targeting drug. CSCs, HMGCR
76  2019 Transcriptomic analysis of the interaction of choriocarcinoma spheroids with receptive vs. non-receptive endometrial epithelium cell lines: an in vitro model for human implantation. ECM, FACS, GFP
77  2019 Transcriptomic expression profiling identifies ITGBL1, an epithelial to mesenchymal transition (EMT)-associated gene, isa promising recurrence prediction biomarker in colorectal cancer. AUROC, CRC, EMT, HR, ITGBL1, OS, RFS
78  2019 Tripartite motif-containing 15 overexpression in non-small cell lung cancer is associated with poor patient prognoses. DEGs, GEO, IHC, Log2FC, LUAD, LUSC, NSCLC, TRIM
79  2019 Vgsc-interacting proteins are genetically associated with pyrethroid resistance in Aedes aegypti. CHL, HTS, NVY, Pum, SNPs, VGSC
80  2018 (-)-Epigallocatechin-3-gallate and EZH2 inhibitor GSK343 have similar inhibitory effects and mechanisms of action on colorectal cancer cells. CRC, EGCG, EZH2, GDC, KEGG
81  2018 18F-FDG PET intensity correlates with a hypoxic gene signature and other oncogenic abnormalities in operable non-small cell lung cancer. FDG-PET, NSCLC
82  2018 A comprehensive analysis of prognosis prediction models based on pathway‑level, gene‑level and clinical information for glioblastoma. GBM, PDS
83  2018 A computational approach to identifycellular heterogeneity andtissue-specific gene regulatory networks. PGSEA
84  2018 A Computational Systems Biology Approach for Identifying Candidate Drugs for Repositioning for Cardiovascular Disease. ---
85  2018 A gene expression-based risk model reveals prognosis of gastric cancer. ---
86  2018 A Genome-wide Expression Association Analysis Identifies Genes and Pathways Associated with Amyotrophic Lateral Sclerosis. ALS, GWAS, SMR
87  2018 A Genomewide Integrative Analysis of GWAS and eQTLs Data Identifies Multiple Genes and Gene Sets Associated with Obesity. BMI, eQTLs, GWAS, WHR
88  2018 A Herpes Simplex Virus Thymidine Kinase-Induced Mouse Model of Hepatocellular Carcinoma Associated with Up-Regulated Immune-Inflammatory-Related Signals. GCV, GO, HCC, HSV-TK
89  2018 A novel correlation between ATP5A1 gene expression and progression of human clear cell renal cell carcinoma identified by co‑expression analysis. ccRCC
90  2018 A novel long non-coding RNA, AC012456.4, as a valuable and independent prognostic biomarker of survival in oral squamous cell carcinoma. CI, DFS, GEO, HR, lncRNAs, OS, OSCC
91  2018 A novel scoring system for gastric cancer risk assessment based on the expression of three CLIP4 DNA methylation-associated genes. apoD, CHRDL1, CLDN11, CLIP4, DEGs, GC
92  2018 A novel system-level approach using RNA-sequencing data identifies miR-30-5p and miR-142a-5p as key regulators of apoptosis in myocardial infarction. GO, MI, NRVMs
93  2018 A signature based on survival-related genes identifies high-risk glioblastomas harboring immunosuppressive and aggressive ECM characteristics. ECM, GO, PPI
94  2018 A Two-Stage Whole-Genome Gene Expression Association Study of Young-Onset Hypertension in Han Chinese Population of Taiwan. ---
95  2018 A Zebrafish Acromegaly Model Elevates DNA Damage and Impairs DNA Repair Pathways. DSB, GH, HRR, NER, NHEJ, RFP, TLS
96  2018 Abnormally elevated USP37 expression in breast cancer stem cells regulates stemness, epithelial-mesenchymal transition and cisplatin sensitivity. BCSCs, DUBs, EMT, Hh, USP37
97  2018 Activation of JNK signaling in osteoblasts is inversely correlated with collagen synthesis in age-related osteoporosis. GO
98  2018 Altered capicua transcriptional repressor gene expression exhibits distinct prognostic value for isocitrate dehydrogenase-mutant oligodendroglial tumors. CIC, GEO, IDH, IHC, OS
99  2018 Analysis of Hierarchical Organization in Gene Expression Networks Reveals Underlying Principles of Collective Tumor Cell Dissemination and Metastatic Aggressiveness of Inflammatory Breast Cancer. CCC, CTCs, EMT, IBC
100  2018 Annexin A7 is correlated with better clinical outcomes of patients with breast cancer. ANXA7, BC