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■ Abbreviation / Long Form : RRE / Rev response element

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Total Number of Papers: 345
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Abbreviation:   RRE  (>> Co-occurring Abbreviation)
Long Form:   Rev response element
 Abbreviation Variation
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No. Year Title Co-occurring Abbreviation
2019 Evolution of the HIV-1 RRE during natural infection reveals nucleotide changes that correlate with altered structure and increased activity over time. ---
2019 Molecular recognition of a branched peptide with HIV-1 Rev Response Element (RRE) RNA. ---
2018 A new HIV-1 Rev structure optimizes interaction with target RNA (RRE) for nuclear export. ---
2018 Automated Recognition of RNA Structure Motifs by Their SHAPE Data Signatures. HIV-1, SP
2018 Discovery of a Branched Peptide That Recognizes the Rev Response Element (RRE) RNA and Blocks HIV-1 Replication. ---
2018 Identification of thienopyridine carboxamides as selective binders of HIV-1 trans Activation Response (TAR) and Rev Response Element (RRE) RNAs. TAR
2018 Influence of gag and RRE Sequences on HIV-1 RNA Packaging Signal Structure and Function. Psi
2018 Nucleolar Localization of HIV-1 Rev Is Required, Yet Insufficient for Production of Infectious Viral Particles. NoLS, WT
2018 Structure of an RNA Aptamer that Can Inhibit HIV-1 by Blocking Rev-Cognate RNA (RRE) Binding and Rev-Rev Association. ---
10  2017 A DEAD-Box Helicase Mediates an RNA Structural Transition in the HIV-1 Rev Response Element. DDX1, Rev
11  2017 A DEAD-box protein acts through RNA to promote HIV-1 Rev-RRE assembly. DDX1, smFRET
12  2017 Binding and thermodynamics of REV peptide-ctDNA interaction. CD, CT-DNA, ITC
13  2017 Contributions of Individual Domains to Function of the HIV-1 Rev Response Element. SAXS
14  2017 In vitro functional assessment of natural HIV-1 group M Vpu sequences using a universal priming approach. ---
15  2017 Inhibition of Multimolecular RNA-Protein Interactions Using Multitarget-Directed Nanohybrid System. MTDLs
16  2017 Subcellular Localization of HIV-1 gag-pol mRNAs Regulates Sites of Virion Assembly. gRNAs, HIV-1, PM, Psi
17  2016 A ratiometric fluorescence RRE RNA-targeted assay for a new fluorescence ligand. QDs
18  2016 Cooperative dimerization of a stably folded protein directed by a flexible RNA in the assembly of the HIV Rev dimer-RRE stem II complex. RNP
19  2016 Cyclic Peptide-Decorated Self-Assembled Nanohybrids for Selective Recognition and Detection of Multivalent RNAs. ---
20  2016 Dynamics of the human and viral m(6)A RNA methylomes during HIV-1 infection of T cells. ---
21  2016 HIV-1 and M-PMV RNA Nuclear Export Elements Program Viral Genomes for Distinct Cytoplasmic Trafficking Behaviors. CTEs, gRNAs, MPMV, MTOC
22  2016 Rev-RRE Functional Activity Differs Substantially Among Primary HIV-1 Isolates. ---
23  2016 Sensitive and Selective Detection of HIV-1 RRE RNA Using Vertical Silicon Nanowire Electrode Array. DPV, VSNEA
24  2016 The Structure of HIV-1 Rev Filaments Suggests a Bilateral Model for Rev-RRE Assembly. ---
25  2015 Double-stranded RNA-specific adenosine deaminase 1 (ADAR1) promotes EIAV replication and infectivity. ADARs, eADAR1, EIAV, HIV, LTR
26  2015 Fluorescent DNA-Protected Silver Nanoclusters for Ligand-HIV RNA Interaction Assay. MTX, RNA, TAR
27  2015 HIV Rev Assembly on the Rev Response Element (RRE): A Structural Perspective. SAXS
28  2015 HIV-1 RRE RNA acts as an RNA silencing suppressor by competing with TRBP-bound siRNAs. RISC, RNAi, si, TAR, TRBP, VA
29  2015 The "complex" RNA post-transcriptional element of a "simple" retrovirus. HIV-1, MLV, REV, XMRV
30  2015 The HIV-1 Rev response element (RRE) adopts alternative conformations that promote different rates of virus replication. HIV
31  2015 Thermodynamics of Rev-RNA interactions in HIV-1 Rev-RRE assembly. ARM, ITC
32  2014 A mammalian circadian clock model incorporating daytime expression elements. NPY, PRCs
33  2014 A reporter based single step assay for evaluation of inhibitors targeting HIV-1 Rev-RRE interaction. ---
34  2014 Analysis of partial recombinants in lentiviral vector preparations. Bsd, RCL
35  2014 Computational modeling suggests dimerization of equine infectious anemia virus Rev is required for RNA binding. EIAV
36  2014 Cooperativity among Rev-associated nuclear export signals regulates HIV-1 gene expression and is a determinant of virus species tropism. hCRM1, mCRM1, mCRM1
37  2014 Functional analyses reveal extensive RRE plasticity in primary HIV-1 sequences selected under selective pressure. ---
38  2014 RNA-directed remodeling of the HIV-1 protein Rev orchestrates assembly of the Rev-Rev response element complex. ---
39  2014 RNA-guided assembly of Rev-RRE nuclear export complexes. SAXS
40  2014 RRE-dependent HIV-1 Env RNA effects on Gag protein expression, assembly and release. CT, Env, vRNA
41  2014 Stable assembly of HIV-1 export complexes occurs cotranscriptionally. FRAP, SSA
42  2014 The export receptor Crm1 forms a dimer to promote nuclear export of HIV RNA. NESs
43  2013 An unusual topological structure of the HIV-1 Rev response element. ---
44  2013 Biosafety features of lentiviral vectors. ---
45  2013 HIV-1 Rev multimerization: mechanism and insights. ---
46  2013 Limited nucleotide changes in the Rev response element (RRE) during HIV-1 infection alter overall Rev-RRE activity and Rev multimerization. SGS
47  2013 Randomized codon mutagenesis reveals that the HIV Rev arginine-rich motif is robust to substitutions and that double substitution of two critical residues alters specificity. ARM, RAI
48  2013 RRE-deleting self-inactivating and self-activating HIV-1 vectors for improved safety. ---
49  2013 RREB1 repressed miR-143/145 modulates KRAS signaling through downregulation of multiple targets. ---
50  2013 The arginine-rich RNA-binding motif of HIV-1 Rev is intrinsically disordered and folds upon RRE binding. ARMs
51  2013 Transcriptional activation of the cholecystokinin gene by DJ-1 through interaction of DJ-1 with RREB1 and the effect of DJ-1 on the cholecystokinin level in mice. CCK, RREBP1
52  2012 A dynamic FRET reporter of gene expression improved by functional screening. ---
53  2012 ADAR1 is a novel multi targeted anti-HIV-1 cellular protein. ---
54  2012 Design of photocontrolled RNA-binding peptidomimetics. ---
55  2012 Dynamic Post-Transcriptional Regulation of HIV-1 Gene Expression. HIV-1
56  2012 Formation of trans-activation competent HIV-1 Rev:RRE complexes requires the recruitment of multiple protein activation domains. ---
57  2012 Genetic and structural analysis of HIV-1 Rev responsive element related to V38A and T18A enfuvirtide resistance mutations. ---
58  2012 In vitro and in vivo analysis of the interaction between RNA helicase A and HIV-1 RNA. 5'-UTR, dsRBDs, RHA
59  2012 Nuclear export and expression of human T-cell leukemia virus type 1 tax/rex mRNA are RxRE/Rex dependent. ATL, HTLV-1, LTR, RNA-IP, RxRE
60  2012 Production of lentiviral vectors for transducing cells from the central nervous system. CNS, cPPT, FACS, LTR, Psi, SIN, VSV-G
61  2012 Quantitative analysis of the bidirectional viral G-protein-coupled receptor and lytic latency-associated nuclear antigen promoter of Kaposi's sarcoma-associated herpesvirus. ICN, KSHV, LANA, vGPCR
62  2012 Structure-activity studies on the fluorescent indicator in a displacement assay for the screening of small molecules binding to RNA. X2S
63  2012 The HIV-1 Rev protein enhances encapsidation of unspliced and spliced, RRE-containing lentiviral vector RNA. gRNA, HIV
64  2012 The HIV-1 Rev response element: an RNA scaffold that directs the cooperative assembly of a homo-oligomeric ribonucleoprotein complex. ---
65  2011 A long-awaited structure is rev-ealed. ---
66  2011 Atomic force microscope-based single-molecule force spectroscopy of RNA unfolding. AFM, SMFS
67  2011 Characterization of the HIV-1 RNA associated proteome identifies Matrin 3 as a nuclear cofactor of Rev function. HIV-1, MATR3
68  2011 Construction of dopamine sensors by using fluorescent ribonucleopeptide complexes. RNP
69  2011 Facile conversion of RNA aptamers to modular fluorescent sensors with tunable detection wavelengths. ---
70  2011 Hsp22 (HspB8/H11) knockdown induces Sam68 expression and stimulates proliferation of glioblastoma cells. Hsp22, PCNA, RNR
71  2011 Interaction of Kaposi's sarcoma-associated herpesvirus ORF59 with oriLyt is dependent on binding with K-Rta. BAC, ChIP, HHV-8, KSHV, PF
72  2011 Matrin 3 is a co-factor for HIV-1 Rev in regulating post-transcriptional viral gene expression. INS
73  2011 Production of HIV particles is regulated by altering sub-cellular localization and dynamics of Rev induced by double-strand RNA binding protein. HIV
74  2011 Replication and transcription activator (RTA) of murine gammaherpesvirus 68 binds to an RTA-responsive element and activates the expression of ORF18. ChIP, EBV, EMSA, KSHV, MHV-68, RTA
75  2011 Rev-free HIV-1 gene delivery system for targeting Rev-RRE-Crm1 nucleocytoplasmic RNA transport pathway. CTE, GFP
76  2011 Single-molecule studies reveal that DEAD box protein DDX1 promotes oligomerization of HIV-1 Rev on the Rev response element. ---
77  2011 Single-nucleotide changes in the HIV Rev-response element mediate resistance to compounds that inhibit Rev function. ---
78  2011 Specificity of RSG-1.2 peptide binding to RRE-IIB RNA element of HIV-1 over Rev peptide is mainly enthalpic in origin. ---
79  2011 Targeted cleavage of HIV RRE RNA by Rev-coupled transition metal chelates. DTPA, EDTA, NTA
80  2010 Comparison of the expression and immunogenicity of wild-type and sequence-modified HIV-1 gag genes in a recombinant Sendai virus vector. rSeV
81  2010 Domain- and nucleotide-specific Rev response element regulation of feline immunodeficiency virus production. ASP, FIV, SLA
82  2010 Fluorescent ribonucleoside as a FRET acceptor for tryptophan in native proteins. ---
83  2010 Genetic and functional analysis of HIV-1 Rev Responsive Element (RRE) sequences from North-India. ---
84  2010 HIV Rev response element (RRE) directs assembly of the Rev homooligomer into discrete asymmetric complexes. RNP
85  2010 MCAF1 and synergistic activation of the transcription of Epstein-Barr virus lytic genes by Rta and Zta. EBV, ZRE
86  2010 Mechanisms controlling titer and expression of bidirectional lentiviral and gammaretroviral vectors. GV, LV
87  2010 Rev-derived peptides inhibit HIV-1 replication by antagonism of Rev and a co-receptor, CXCR4. ---
88  2010 Structural basis for cooperative RNA binding and export complex assembly by HIV Rev. RNP
89  2009 An isostructural G-G to A-A substitution within the HIV RRE RNA switches the specificity towards arginine-rich peptides. ---
90  2009 HIV-1 Rev protein assembles on viral RNA one molecule at a time. ---
91  2009 Identification and characterization of a new Kaposi's sarcoma-associated herpesvirus replication and transcription activator (RTA)-responsive element involved in RTA-mediated transactivation. KSHV, RTA
92  2009 Matrix mediates the functional link between human immunodeficiency virus type 1 RNA nuclear export elements and the assembly competency of Gag in murine cells. HIV-1, MA, NC
93  2009 Photocrosslinking of RNA and photoMet-containing amphiphilic alpha-helical peptides. ---
94  2009 Structural analysis of ribonucleopeptide aptamer against ATP. ---
95  2009 Structure of the HIV-1 Rev response element alone and in complex with regulator of virion (Rev) studied by atomic force microscopy. Rev
96  2009 Synonymous mutations in stem-loop III of Rev responsive elements enhance HIV-1 replication impaired by primary mutations for resistance to enfuvirtide. ---
97  2009 Thermodynamic profiling of HIV RREIIB RNA-zinc finger interactions. ZnFs
98  2009 Trafficking through the Rev/RRE pathway is essential for efficient inhibition of human immunodeficiency virus type 1 by an antisense RNA derived from the envelope gene. CTE, HIV-1, MPMV
99  2009 Treatment with the fusion inhibitor enfuvirtide influences the appearance of mutations in the human immunodeficiency virus type 1 regulatory protein rev. ENF, HIV-1
100  2009 Upregulation of smpd3 via BMP2 stimulation and Runx2. ---