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■ Abbreviation / Long Form : SSU / small subunit

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Total Number of Papers: 870
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Abbreviation:   SSU  (>> Co-occurring Abbreviation)
Long Form:   small subunit
 Abbreviation Variation
 Long Form Variation
 Pair(Abbreviation/Long Form) Variation
No. Year Title Co-occurring Abbreviation
2020 A new method of metabarcoding Microsporidia and their hosts reveals high levels of microsporidian infections in mosquitoes (Culicidae). ---
2020 Additional new species suggest high dictyostelid diversity on Madagascar. ---
2020 An unexpectedly complex mitoribosome in Andalucia godoyi, a protist with the most bacteria-like mitochondrial genome. LSU, mt-rRNA, mtRPs
2020 Clinical crenosomosis in a black bear (Ursus americanus). LSU, PCR
2020 Design of targeted primers based on 16S rRNA sequences in meta-transcriptomic datasets and identification of a novel taxonomic group in the Asgard archaea. ---
2020 Diagnosis and prevalence of two new species of haplosporidians infecting shore crabs Carcinus maenas: Haplosporidium carcini n. sp., and H. cranc n. sp. ---
2020 Diversity and phylogeny of basidiomycetous yeasts from plant leaves and soil: Proposal of two new orders, three new families, eight new genera and one hundred and seven new species. cyt b, LSU, rDNA, tef1
2020 First report of Neovaginatispora fuckelii causing leaf spot on Phoenix canariensis. ITS, LSU, PDA, RPB2, TEF1-alpha
2020 First report of Sclerotium rolfsii causing collar rot on Berseem (Trifolium alexandrinum) in India. IGFRI, ITS, LSU
10  2020 High-Throughput DNA Sequence-Based Analysis of AMF Communities. AMF, ITS
11  2020 Hybrid Cyanobacterial-Tobacco Rubisco Supports Autotrophic Growth and Procarboxysomal Aggregation. CCM, LSU, Se
12  2020 Marine mammal skin microbiotas are influenced by host phylogeny. ---
13  2020 Molecular and morphological characterisation of a novel microsporidian species, Tubulinosema suzukii, infecting Drosophila suzukii (Diptera: Drosophilidae). ITS
14  2020 Molecular characterization of Cryptosporidium spp. and Giardia duodenalis in experimental rats in China. bg, GDH, TPI
15  2020 Molecular detection of Cryptosporidium spp. and Enterocytozoon bieneusi in Longjiang Wagyu cattle in Northeastern China. CI, ITS
16  2020 Morphological and molecular data reveal a new species of Lueheia (Acanthocephala: Plagiorhynchidae) from Turdus migratorius (Turdidae) in central Mexico and its phylogenetic implications within the family. LSU
17  2020 Morphological Redescriptions and Molecular Phylogeny of Three Stentor Species (Ciliophora: Heterotrichea: Stentoridae) from Korea. ---
18  2020 Ochraceocephala foeniculi gen. et sp. nov., a new pathogen causing crown rot of fennel in Italy. ITS, LSU
19  2020 Parvilucifera multicavata sp. nov. (Alveolata, Perkinsozoa), a New Parasitoid Infecting Marine Dinoflagellates Having Abundant Apertures on the Sporangium. LSU, rDNA
20  2020 Pediludiella daitoensis gen. et sp. nov. (Scenedesmaceae, Chlorophyceae), a large coccoid green alga isolated from a Loxodes ciliate. CBCs
21  2020 Phylogenetic analysis and geographical distribution of Theileria equi and Babesia caballi sequences from horses residing in Spain. EP
22  2020 Protein Arginine Methyltransferase 3 Fine-tunes the Assembly/Disassembly of Pre-Ribosome to Repress Nucleolar Stress by Interacting with RPS2B in Arabidopsis. pre-rRNAs, RPS2
23  2020 Putative group I introns in the eukaryote nuclear internal transcribed spacers. LSU
24  2020 Rubisco and carbon-concentrating mechanism co-evolution across chlorophyte and streptophyte green algae. CCM
25  2020 Sand fly typing: a simple and morphologically-supported method based on polymorphism of 18S rRNA gene in a Leishmaniasis endemic area of Argentina. ATL, RFLP
26  2020 Septoglomus mexicanum, a new species of arbuscular mycorrhizal fungi from semiarid regions in Mexico. AMF, LSU
27  2020 snR30/U17 Small Nucleolar Ribonucleoprotein: A Critical Player during Ribosome Biogenesis. rRNA, snoRNP
28  2020 Streamlined and Abundant Bacterioplankton Thrive in Functional Cohorts. acI-A, acI-A
29  2020 The Effectiveness of a Dark Septate Endophytic Fungus, Cladophialophora chaetospira SK51, to Mitigate Strawberry Fusarium Wilt Disease and With Growth Promotion Activities. DSE, Fof, ITS, LSU
30  2020 The translational activator Sov1 coordinates mitochondrial gene expression with mitoribosome biogenesis. ---
31  2020 Untangling Species-Level Composition of Complex Bacterial Communities through a Novel Metagenomic Approach. ITS
32  2019 "Enterocytozoon bieneusi and Cryptosporidium: a cross-sectional study conducted throughout Thailand". ITS
33  2019 A well supported multi gene phylogeny of 52 dictyostelia. ---
34  2019 Acanthocephalan Parasites of the Oarfish, Regalecus russelii (Regalecidae), With A Description of A New Species of Gymnorhadinorhynchus (Acanthocephala: Gymnorhadinorhynchidae). LSU
35  2019 Assessing the Diversity and Distribution of Apicomplexans in Host and Free-Living Environments Using High-Throughput Amplicon Data and a Phylogenetically Informed Reference Framework. HTES
36  2019 Characterization of microsporidian Ameson herrnkindi sp. nov. infecting Caribbean spiny lobsters Panulirus argus. FL
37  2019 Development and evaluation of molecular tools for detecting and differentiating intestinal amoebae in healthy individuals. PCRs
38  2019 Environmental DNA Sequencing Reveals a Highly Complex Eukaryote Community in Sansha Yongle Blue Hole, Xisha, South China Sea. OTUs
39  2019 Experimental warming alters the community composition, diversity, and N2 fixation activity of peat moss (Sphagnum fallax) microbiomes. ---
40  2019 Expression of infection-related immune response in European sea bass (Dicentrarchus labrax) during a natural outbreak from a unique dinoflagellate Amyloodinium ocellatum. AO, qPCR
41  2019 First detection of Cryptosporidium spp. in red-bellied tree squirrels (Callosciurus erythraeus) in China. ---
42  2019 Gyrodinium jinhaense n. sp., a New Heterotrophic Unarmored Dinoflagellate from the Coastal Waters of Korea. LSU
43  2019 Infection by the microsporidium of Clado Nosema/Vairimorpha in pupal parasitoids. ---
44  2019 Integrated evolution of ribosomal RNAs, introns, and intron nurseries. LSU
45  2019 Integrative taxonomic approach of trypanosomes in the blood of rodents and soricids in Asian countries, with the description of three new species. gGAPDH
46  2019 Metabarcoding assessment of prokaryotic and eukaryotic taxa in sediments from Stellwagen Bank National Marine Sanctuary. ITS, SBNMS
47  2019 Molecular evidence linking the larval and adult stages of Mexiconema cichlasomae (Dracunculoidea: Daniconematidae) from Mexico, with notes on its phylogenetic position among Dracunculoidea. ---
48  2019 Molecular prevalence and subtyping of Cryptosporidium hominis among captive long-tailed macaques (Macaca fascicularis) and rhesus macaques (Macaca mulatta) from Hainan Island, southern China. NHPs, PCR
49  2019 Molecular Subtyping of Blastocystis from Diverse Animals in the United Arab Emirates. ---
50  2019 Morphological and Molecular Identification of a New Ciliate, Zoothamnium palmphlatum nov. spec. (Ciliophora, Peritrichia) from North China. ---
51  2019 Morphological identification and molecular characterization of 18S rDNA of two hemiurid trematodes (Lecithocladium cristatum Rudolphi, 1819 and Lecithocladium parviovum Yamaguti, 1953) infecting the greater lizardfish Saurida tumbil (Pisces: Synodontidae) inhabiting the Red Sea. ---
52  2019 Morphological Redescription and Molecular Identification of Trichodina reticulata Hirschmann & Partsch, 1955 (Ciliophora, Mobilida, Trichodinidae) with the Supplemental New Data of SSU rDNA and ITS-5.8S rDNA. ITS
53  2019 Nephrocystidium pickii Weissenberg, 1921 belongs to Myxozoa (Cnidaria) but is not conspecific with Myxidium lieberkuehni Butschli, 1882 (Myxozoa: Bivalvulida: Variisporina: Myxidiidae): molecular-genetic evidence. ---
54  2019 Occurrence and molecular characterization of Giardia duodenalis in child population from Colombia. bg, TPI
55  2019 Phylogenetic diversity in freshwater-dwelling Isochrysidales haptophytes with implications for alkenone production. LSU, rRNA
56  2019 Prevalence, Morphological and Molecular Phylogenetic Analyses of the Rabbit Pinworm, Passalurus ambiguus Rudolphi 1819, in the Domestic Rabbits Oryctolagus cuniculus. ---
57  2019 Proteins and RNA sequences required for the transition of the t-Utp complex into the SSU processome. t-Utps
58  2019 Residue conservation elucidates the evolution of r-proteins in ribosomal assembly and function. LSU, PP, PR, r-proteins
59  2019 Root-Colonizing Endophytic Fungi of the Dominant Grass Stipa krylovii From a Mongolian Steppe Grassland. DSEs, ITS, LSU, TEF
60  2019 Sas10 controls ribosome biogenesis by stabilizing Mpp10 and delivering the Mpp10-Imp3-Imp4 complex to nucleolus. ---
61  2019 Sporobolomyces agrorum sp. nov. and Sporobolomyces sucorum sp. nov., two novel basidiomycetous yeast species isolated from grape and apple must in Italy. ITS
62  2019 Statistical Analysis of Community RNA Transcripts between Organic Carbon and Geogas-Fed Continental Deep Biosphere Groundwaters. ---
63  2019 Ultrastructure and phylogenetic characterization of the microsporidian parasite Heterosporis lessepsianus n. sp. (Microsporidia: Glugeidae) infecting the lizardfish Saurida lessepsianus (Pisces: Synodontidae) inhabiting the Red Sea. ---
64  2019 Ultrastructure, phylogeny and histopathology of two novel haplosporidians parasitising amphipods, and importance of crustaceans as hosts. ---
65  2019 Using the SSU, ITS, and Ribosomal DNA Operon Arrangement to Characterize Two Microsporidia Infecting Bruce Spanworm, Operophtera bruceata (Lepidoptera: Geometridae). ---
66  2018 A Contribution to the Morphology and Phylogeny of Chlamydodon, with Three New Species from China (Ciliophora, Cyrtophoria). BI, ML
67  2018 A New Molecular Approach Based on the Secondary Structure of Ribosomal RNA for Phylogenetic Analysis of Mobilid Ciliates. ---
68  2018 Biliary Tract-Infecting Myxosporeans from Estuarine and Reef Stonefish (Scorpaeniformes: Synanceiidae) Off Eastern Australia, with Descriptions of Sphaeromyxa horrida n. sp. and Myxidium lapipiscis n. sp. (Myxosporea: Bivalvulida). ---
69  2018 Botryosphaeriaceae from Eucalyptus plantations and adjacent plants in China. cmdA, LSU, tef1, TUB
70  2018 Characterization of 16S rRNA Processing with Pre-30S Subunit Assembly Intermediates from E. coli. rRNA
71  2018 Characterizing the Human Mycobiota: A Comparison of Small Subunit rRNA, ITS1, ITS2, and Large Subunit rRNA Genomic Targets. LSU
72  2018 Chronic Cytauxzoon felis infections in wild-caught bobcats (Lynx rufus). ITS1 and ITS2
73  2018 Dinoflagellates Amyloodinium and Ichthyodinium (Dinophyceae), parasites of marine fishes in the South Atlantic Ocean. ITS
74  2018 Discriminatory Power Evaluation of Nuclear Ribosomal RNA Barcoding Sequences Through Ophiocordyceps sinensis Related Samples. ITS, LSU
75  2018 Diversification of Secondary Metabolite Biosynthetic Gene Clusters Coincides with Lineage Divergence in Streptomyces. NDR, ORFs, SDR, SMGCs
76  2018 EukRef-Ciliophora: a manually curated, phylogeny-based database of small subunit rRNA gene sequences of ciliates. HTS
77  2018 Flooding Duration Affects the Structure of Terrestrial and Aquatic Microbial Eukaryotic Communities. ITS
78  2018 Gambierdiscus jejuensis sp. nov., an epiphytic dinoflagellate from the waters of Jeju Island, Korea, effect of temperature on the growth, and its global distribution. ITS, LSU
79  2018 Halioticida noduliformans infection in eggs of lobster (Homarus gammarus) reveals its generalist parasitic strategy in marine invertebrates. LSU
80  2018 Improved 18S small subunit rDNA primers for problematic nematode amplification. ---
81  2018 Intragenomic nuclear RNA variation in a cryptic Amanita taxon. ITS, RPB2
82  2018 Metatranscriptomes Reveal That All Three Domains of Life Are Active but Are Dominated by Bacteria in the Fennoscandian Crystalline Granitic Continental Deep Biosphere. ---
83  2018 Molecular Characterization and Phylogeny of Ditylenchus weischeri from Cirsium arvense in the Prairie Provinces of Canada. ITS rDNA, LSU
84  2018 Molecular Characterization of Prototheca strains isolated in China revealed the first cases of protothecosis associated with Prototheca zopfii genotype 1. MALDI-TOF MS, PCR
85  2018 Molecular characterizations of Cryptosporidium spp. and Enterocytozoon bieneusi in brown rats (Rattus norvegicus) from Heilongjiang Province, China. ITS
86  2018 Molecular detection and genetic characterizations of Cryptosporidium spp. in farmed foxes, minks, and raccoon dogs in northeastern China. ---
87  2018 Molecular genotyping of Giardia duodenalis in children from Behbahan, southwestern Iran. TPI
88  2018 Molecular identification of Blastocystis sp. subtypes in water samples collected from Black sea, Turkey. PCR, ST
89  2018 Molecular investigation of Cryptosporidium in farmed chickens in Hubei Province, China, identifies 'zoonotic' subtypes of C. meleagridis. ---
90  2018 Molecular Phylogenetic Positions of Two New Marine Gregarines (Apicomplexa)-Paralecudina anankea n. sp. and Lecudina caspera n. sp.-from the Intestine of Lumbrineris inflata (Polychaeta) Show Patterns of Co-evolution. ---
91  2018 More amoebae from the deep-sea: Two new marine species of Vexillifera (Amoebozoa, Dactylopodida) with notes on taxonomy of the genus. ---
92  2018 Morphological plasticity in Myxobolus Butschli, 1882: a taxonomic dilemma case and renaming of a parasite species of the common carp. ---
93  2018 Morphology and molecular systematic of marine gregarines (Apicomplexa) from Southwestern Atlantic spionid polychaetes. ---
94  2018 Morphology and Phylogeny of Two Novel Ciliates, Arcanisutura chongmingensis n. gen., n. sp. and Naxella paralucida n. sp. from Shanghai, China. ---
95  2018 Morphology, morphogenesis and molecular phylogeny of a new brackish water subspecies, Neourostylopsis flava paraflava nov. subsp. (Ciliophora, Hypotrichia, Urostylidae), with redefinition of the genus Neourostylopsis. ---
96  2018 Morphology, morphogenesis, and phylogeny of an Anteholosticha intermedia (Ciliophora, Urostylida) population from the United States. ---
97  2018 New operational taxonomic units of Enterocytozoon in three marsupial species. ITS
98  2018 Observations on Malenchus geraerti n. sp. (Rhabditida: Tylenchidae), a morphological and molecular phylogenetic study. LSU
99  2018 Occurrence and genetic characterization of Giardia duodenalis and Cryptosporidium spp. from adult goats in Sichuan Province, China. bg, bg, GDH, MLGs, TPI
100  2018 Occurrence and molecular characterization of Cryptosporidium spp., Giardia duodenalis, and Enterocytozoon bieneusi from Tibetan sheep in Gansu, China. bg, ITS, MLST