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■ Abbreviation / Long Form : URR / upstream regulatory region

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Abbreviation:   URR  (>> Co-occurring Abbreviation)
Long Form:   upstream regulatory region
 Abbreviation Variation
 Long Form Variation
 Pair(Abbreviation/Long Form) Variation
No. Year Title Co-occurring Abbreviation
2020 Methylation of CpG 5962 in L1 of the human papillomavirus 16 genome as a potential predictive marker for viral persistence: A prospective large cohort study using cervical swab samples. ---
2019 Role of DNA methylation in HPV associated lesions. ---
2018 Anal HPV infection and correlates in HIV-infected patients attending a Sexually Transmitted Infection clinic in Brazil. AIN, STI
2018 Extended HLA-G haplotypes in patients with age-related macular degeneration. AMD, HLA, UTR
2017 Methylation of CpG sites in the upstream regulatory region, physical status and mRNA expression of HPV-6 in adult-onset laryngeal papilloma. AO-LP, PCR
2017 Persistence of an Oncogenic Papillomavirus Genome Requires cis Elements from the Viral Transcriptional Enhancer. HPV
2016 NF-Y loss triggers p53 stabilization and apoptosis in HPV18-positive cells by affecting E6 transcription. ---
2016 Post-Transcriptional Regulation of KLF4 by High-Risk Human Papillomaviruses Is Necessary for the Differentiation-Dependent Viral Life Cycle. EBV, HPVs
2015 Comprehensive analysis of polymorphisms in the HLA-G 5' upstream regulatory and 3' untranslated regions in Brazilian patients with systemic lupus erythematosus. CI, HLA, OR, SLE, UTR
10  2015 Human Papillomavirus Type 18 cis-Elements Crucial for Segregation and Latency. BPV-1
11  2015 Identification of transcription factor AML-1 binding site upstream of human cytomegalovirus UL111A gene. AML-1, HCMV
12  2015 Implication of HLA-G 5' upstream regulatory region polymorphisms in idiopathic recurrent spontaneous abortions. RSA, SNP
13  2014 Haplotype determination of the upstream regulatory region and the second exon of the BoLA-DRB3 gene in Holstein cattle. ABS
14  2013 A 286bp upstream regulatory region of a rice anther-specific gene, OSIPP3, confers pollen-specific expression in Arabidopsis. ---
15  2013 Analyzing HLA-G polymorphisms in children from women with scleroderma. MC, sHLA-G, UTR
16  2013 Differential methylation of E2 binding sites in episomal and integrated HPV 16 genomes in preinvasive and invasive cervical lesions. E2BSs 1-4
17  2013 Enhanced transgene expression in mammalian cells by recombinant baculovirus vector containing bovine papillomavirus type 1 replication elements. BPV-1, EGFP
18  2013 Evolution and taxonomic classification of alphapapillomavirus 7 complete genomes: HPV18, HPV39, HPV45, HPV59, HPV68 and HPV70. alpha-7, NCR1, NCR2
19  2012 Human papillomavirus (HPV) genotype 18 variants in patients with clinical manifestations of HPV related infections in Bilbao, Spain. HPV, HSIL
20  2012 Human papillomavirus DNA methylation as a potential biomarker for cervical cancer. HPV
21  2012 Identification of four novel alleles of the BoLA-DRB3 upstream regulatory region in Chinese yellow cattle. ---
22  2012 Lack of methylation in the upstream region of human papillomavirus type 6 from aerodigestive tract papillomas. HPV-16
23  2011 Characterization and validation of bovine gonadotripin releasing hormone receptor (GNRHR) polymorphisms. GNRHR, GnRHR
24  2011 Differential methylation of the HPV 16 upstream regulatory region during epithelial differentiation and neoplastic transformation. ---
25  2011 Methylation of HPV16 genome CpG sites is associated with cervix precancer and cancer. CIN, HPV-16, ICC, mtDNA
26  2010 [Human papillomavirus type 16 variant analysis of upstream regulatory region and E6, E7 oncogene from cervical cancer patients in Beijing]. ---
27  2009 Cellular factor YY1 downregulates the human papillomavirus 16 E6/E7 promoter, P97, in vivo and in vitro from a negative element overlapping the transcription-initiation site. HPV-16
28  2009 Cellular factors are required to activate bovine papillomavirus-1 early gene transcription and to establish viral plasmid persistence but are not required for cellular transformation. BPV, HPVs, TEF
29  2009 Upstream regulatory region alterations found in human papillomavirus type 16 (HPV-16) isolates from cervical carcinomas increase transcription, ori function, and HPV immortalization capacity in culture. HPV, HPV-16, HPV16
30  2008 Differences in transcriptional activity of cutaneous human papillomaviruses. HPV
31  2008 Regulation of human papillomavirus type 31 gene expression during the differentiation-dependent life cycle through histone modifications and transcription factor binding. KE
32  2007 Complete genomes and phylogenetic positions of bovine papillomavirus type 8 and a variant type from a European bison. bp, BPV, ORF
33  2007 NFI is an essential positive transcription factor for human papillomavirus type 16 early gene expression. EMSAs, HPV-16
34  2007 Transcriptional regulation of human papillomavirus type 18 P105 promoter by the co-activator CBP. HPVs
35  2006 CCAAT/enhancer-binding protein beta represses human papillomavirus 11 upstream regulatory region expression through a promoter-proximal YY1-binding site. HFK, HPV
36  2006 Different papillomaviruses have different repertoires of transcription factor binding sites: convergence and divergence in the upstream regulatory region. PVs, TFBS
37  2006 Differential regulation of different human papilloma virus variants by the POU family transcription factor Brn-3a. HPV-16
38  2005 Polymorphisms of the upstream regulatory region of the major histocompatibility complex DRB genes in domestic horses. MHC, PCR-SSCP
39  2005 Sequence variation and the transcriptional activity of the upstream regulatory region in human papillomavirus 16 E7 variants in cervical cancer of Korean women. CAT, TFBS
40  2005 Silencing of integrated human papillomavirus type 18 oncogene transcription in cells expressing SerpinB2. HPV-18, LIP, PAI-2, Rb
41  2005 Variant upstream regulatory region sequences differentially regulate human papillomavirus type 16 DNA replication throughout the viral life cycle. HPV, HPV16
42  2004 Genetic and biochemical analysis of cis regulatory elements within the keratinocyte enhancer region of the human papillomavirus type 31 upstream regulatory region during different stages of the viral life cycle. AE, HPV31, KE
43  2004 NFI-Ski interactions mediate transforming growth factor beta modulation of human papillomavirus type 16 early gene expression. HPV16, HPVs, NFI, TGF-beta
44  2004 Polymorphism in the bovine BOLA-DRB3 upstream regulatory regions detected through PCR-SSCP and DNA sequencing. PCR-SSCP
45  2003 A functional interferon regulatory factor-1 (IRF-1)-binding site in the upstream regulatory region (URR) of human papillomavirus type 16. HPV, IFN-gamma, IRF-1, IRF-E
46  2003 Comparison of the basal and glucocorticoid-inducible activities of the upstream regulatory regions of HPV18 and HPV31 in multiple epithelial cell lines. DEX, HPV
47  2003 Relative quantification of HLA-DRA1 and -DQA1 expression by real-time reverse transcriptase-polymerase chain reaction (RT-PCR). GAPDH, MMLV, RT-PCR
48  2003 The role of steroid contraceptive hormones in the pathogenesis of invasive cervical cancer: a review. HPV
49  2003 Two separate replication modes of the bovine papillomavirus BPV1 origin of replication that have different sensitivity to p53. ---
50  2002 Adenoassociated virus type 2-induced inhibition of the human papillomavirus type 18 promoter in transgenic mice. AAV, AAV2, HPV, HPV18
51  2002 Diindolylmethane alters gene expression in human keratinocytes in vitro. DIM, HaCaT, HFK, HPV, I3C, NF-IL6
52  2002 Down-regulation of human papillomavirus E6/E7 oncogene by arsenic trioxide in cervical carcinoma cells. HPV
53  2002 Genetic analysis of cis regulatory elements within the 5' region of the human papillomavirus type 31 upstream regulatory region during different stages of the viral life cycle. ---
54  2002 Growth arrest of HPV-positive cells after histone deacetylase inhibition is independent of E6/E7 oncogene expression. CIP1, HDAC, TSA
55  2002 Interleukin-10 induces transcription of the early promoter of human papillomavirus type 16 (HPV16) through the 5'-segment of the upstream regulatory region (URR). HPV-16, HPVs, IL-10
56  2002 Sequence variation and physical state of human papillomavirus type 16 cervical cancer isolates from Australia and New Caledonia. HPV
57  2002 The upstream regulatory region of human papillomavirus type 31 is insensitive to glucocorticoid induction. DEX, GREs, HPV-11, HPVs
58  2001 Reinitiated expression of EJras transgene in targeted epidermal cells of transgenic rabbits by cottontail rabbit papillomavirus infection. CRPV
59  2001 Variable oncogene promoter activity of human papillomavirus type 16 cervical cancer isolates from Australia. HPV-16
60  2000 Analysis of mutations in the URR and E6/E7 oncogenes of HPV 16 cervical cancer isolates from central China. HPV
61  2000 Assembly of human papillomavirus type 16 pseudovirions in Saccharomyces cerevisiae. PV, VLPs
62  2000 Molecular mechanism of carcinogenesis by human papillomavirus-16. HPVs
63  1999 DNA replication of human papillomavirus type 31 is modulated by elements of the upstream regulatory region that lie 5' of the minimal origin. AE, HPV31, KE
64  1999 Human papillomavirus detection by PCR and typing by dot-blot. ORFs
65  1999 Long-term episomal maintenance of bovine papillomavirus type 1 plasmids is determined by attachment to host chromosomes, which Is mediated by the viral E2 protein and its binding sites. BPV-1
66  1999 Response to IL-6 of HPV-18 cervical carcinoma cell lines. HPV-18
67  1999 The core promoter of hepatitis B virus. BCP, CP, HBeAg, HBV, ORF, pg, preC
68  1999 The effect of proteolytic enzymes on hair follicles of transgenic mice expressing the lac Z-protein in cells of the bulge region. HPV-11
69  1999 Trichostatin A up-regulates human papillomavirus type 11 upstream regulatory region-E6 promoter activity in undifferentiated primary human keratinocytes. HPV, HPV-11, LTR, PHKs
70  1998 Coding defect and a TATA box mutation at the bilirubin UDP-glucuronosyltransferase gene cause Crigler-Najjar type I disease. CN, CN-II
71  1998 Differential requirements for conserved E2 binding sites in the life cycle of oncogenic human papillomavirus type 31. HPV, HPV31
72  1998 Novel binding sites for regulatory factors in the human papillomavirus type 18 enhancer and promoter identified by in vivo footprinting. HPV18, HPVs
73  1998 Overexpression of C/EBPbeta represses human papillomavirus type 18 upstream regulatory region activity in HeLa cells by interfering with the binding of TATA-binding protein. HPV-18
74  1998 Point mutations in SP1 motifs in the upstream regulatory region of human papillomavirus type 18 isolates from cervical cancers increase promoter activity. HPV, YY1
75  1998 Post-transcriptional induction of p21cip1 protein by human papillomavirus E7 inhibits unscheduled DNA synthesis reactivated in differentiated keratinocytes. HPVs, PHKs
76  1997 Cytokeratin patterns of expression in human epithelial cell lines correlate with transcriptional activity of the human papillomavirus type 16 upstream regulatory region. HPV-16
77  1997 Human papillomavirus and host variables as predictors of clinical course in patients with juvenile-onset recurrent respiratory papillomatosis. HPV
78  1997 Identification of cis-regulatory elements in the upstream regulatory region of human papillomavirus type 59. EMSA, HPV-59
79  1997 Mutational analyses of differentiation-dependent human papillomavirus type 18 enhancer elements in epithelial raft cultures of neonatal foreskin keratinocytes. HPVs
80  1997 Regulation of human papillomavirus type 18 in vivo: effects of estrogen and progesterone in transgenic mice. HPV
81  1997 Sequence variation in the upstream regulatory region of HPV 18 isolates from cervical cancers. EMSA, HPV
82  1997 The 5' region of the human papillomavirus type 31 upstream regulatory region acts as an enhancer which augments viral early expression through the action of YY1. EMSAs
83  1997 Transcription activities of human papillomavirus type 11 E6 promoter-proximal elements in raft and submerged cultures of foreskin keratinocytes. HPVs
84  1997 Two-component regulatory system involved in transcriptional control of heavy-metal homoeostasis in Alcaligenes eutrophus. DRR
85  1996 A novel C/EBP beta-YY1 complex controls the cell-type-specific activity of the human papillomavirus type 18 upstream regulatory region. HPV-18
86  1996 DQB1 promoter sequence variability and linkage in caucasoids. ---
87  1996 Human papillomavirus type 16 in infants: use of DNA sequence analyses to determine the source of infection. HPV-16
88  1995 A switch region determines the cell type-specific positive or negative action of YY1 on the activity of the human papillomavirus type 18 promoter. HPV-18
89  1995 cis-Acting components of human papillomavirus (HPV) DNA replication: linker substitution analysis of the HPV type 11 origin. HPV, HPV-11
90  1995 Detection of human papillomavirus DNA sequences in cancer of the urinary bladder by in situ hybridisation and polymerase chain reaction. HPV-16, PCR
91  1995 Early-onset pauciarticular juvenile chronic arthritis is associated with a mutation in the Y-box of the HLA-DQA1 promoter. EOPA-JCA
92  1995 Methylation of cottontail rabbit papillomavirus DNA and tissue-specific expression in transgenic rabbits. ---
93  1995 Nucleotide-sequence of a canine oral papillomavirus containing a long noncoding region. COPV, HPV-1, LNCR, PVs, S-NCR
94  1995 Transcriptional control of human papillomavirus type 18 oncogene expression in different cell lines: role of transcription factor YY1. HPV-18
95  1994 Demonstration of URR-duplication variants of human papillomavirus type 6 in paraffin-embedded tissue sections of one condyloma acuminatum and one Buschke-Loewenstein tumour. HPV 6, PCR
96  1994 Replicative intermediates of human papillomavirus type 11 in laryngeal papillomas: site of replication initiation and direction of replication. ---
97  1994 Sequence rearrangements in the upstream regulatory region of human papillomavirus type 6: are these involved in malignant transition? HPV-6
98  1993 A novel cis-stimulatory element maps to the 5' portion of the human papillomavirus type 18 upstream regulatory region and is functionally dependent on a sequence-aberrant Sp1 binding site. HPV
99  1993 Cell-type-specific activity of the human papillomavirus type 18 upstream regulatory region in transgenic mice and its modulation by tetradecanoyl phorbol acetate and glucocorticoids. HPV-18, TPA
100  1993 P3 promoter element of bovine papillomavirus. BPV, CAT