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■ Abbreviation / Long Form : Ub / ubiquitin

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Total Number of Papers: 1219
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Abbreviation:   Ub  (>> Co-occurring Abbreviation)
Long Form:   ubiquitin
 Abbreviation Variation
 Long Form Variation
 Pair(Abbreviation/Long Form) Variation
No. Year Title Co-occurring Abbreviation
2020 1H, 13C, 15N backbone and side-chain resonance assignment of the native form of UbcH7 (UBE2L3) through solution NMR spectroscopy. UBC
2020 A General in Vitro Assay for Studying Enzymatic Activities of the Ubiquitin System. FRET, FUSS
2020 A new gene inventory of the ubiquitin and ubiquitin-like conjugation pathways in Giardia intestinalis. BLAST, HMMs, Ub-L
2020 Arabidopsis RAD23B regulates pollen development by mediating KRP1 degradation. KRP1, RAD23, UBA, UBL
2020 Bovine papillomavirus E5 oncoprotein upregulates parkin-dependent mitophagy in urothelial cells of cattle with spontaneous papillomavirus infection: A mechanistic study. BPV, ERas, Mfn2, PI3K
2020 Computational approach to target USP28 for regulating Myc. PPIs
2020 Decoupling deISGylating and deubiquitinating activities of the MERS virus papain-like protease. deISG, DUB, ISG15, MERS
2020 Disruption of the polyubiquitin gene Ubb reduces the self-renewal capacity of neural stem cells. HT, KO, NSCs, WT
2020 Drosophila NUAK functions with Starvin/BAG3 in autophagic protein turnover. Atg8a, BAG3, Fil, MHC, RNAi, Stv
10  2020 Ehrlichia chaffeensisTRP120-mediated ubiquitination and proteasomal degradation of tumor suppressor FBW7 increases oncoprotein stability and promotes infection. E. chaffeensis, FBW7, NICD
11  2020 Enhancing the incorporation of lysine derivatives into proteins with methylester forms of unnatural amino acids. GFP, UAA
12  2020 Exogenous Ubiquitin Attenuates Hypoxia/Reoxygenation-Induced Cardiac Myocyte Apoptosis via the Involvement of CXCR4 and Modulation of Mitochondrial Homeostasis. ARVMs, I/R
13  2020 Exploring the Promise of Targeting Ubiquitin-Proteasome System to Combat Alzheimer's Disease. AD
14  2020 Extracellular ubiquitin levels are increased in coronary heart disease and associated with the severity of the disease. ACS, AMI, AUC, CHD, CK-MB, CRP, cTnI, LDL-C, ROC, SAP, SDF-1a, UAP
15  2020 Facile Semisynthesis of Ubiquitylated Peptides with the Ligation Auxiliary 2-Aminooxyethanethiol. ---
16  2020 Isopeptide-N-ethylated deubiquitylase-resistant ubiquitin probes made through an E1-catalyzed chemoenzymatic strategy. DUB
17  2020 Lysosomal integral membrane protein LGP85 (LIMP-2) is ubiquitinated at the N-terminal cytoplasmic domain. ELCs
18  2020 Machine Learning Driven Analysis of Large Scale Simulations Reveals Conformational Characteristics of Ubiquitin Chains. ---
19  2020 Mass Spectrometry-Based Characterization of Ub- and UbL-Modified Proteins. MS, UBL
20  2020 Protein Engineering in the Ubiquitin System: Tools for Discovery and Beyond. DUBs, UBDs
21  2020 Recruitment of Ubiquitin within an E2 Chain Elongation Complex. UBA
22  2020 Regulation of reticulophagy by the N-degron pathway. Arg, ER, Nt-Arg
23  2020 Residual Dipolar-Coupling-Based Conformational Comparison of Noncovalent Ubiquitin Homodimer with Covalently Linked Diubiquitin. RDCs
24  2020 Ring Finger Protein 11 acts on ligand-activated EGFR via the direct interaction with the UIM region of ANKRD13 protein family. ANKRD13, EGFR, RNF11, SILAC, UIM
25  2020 RNA Binding Suppresses Tsg101 Recognition of Ub-Modified Gag and Facilitates Recruitment to the Plasma Membrane. NC
26  2020 Structural Aspects of Plant Hormone Signal Perception and Regulation by Ubiquitin Ligases. ---
27  2020 Structural insights into the mechanism and inhibition of transglutaminase-induced ubiquitination by the Legionella effector MavC. ---
28  2020 The length of a ubiquitin chain is a general determinant for selective recognition by ubiquitin-binding proteins. GELFrEE, UBPs
29  2020 The structure and regulation of the E3 ubiquitin ligase HUWE1 and its biological functions in cancer. ---
30  2020 Total Chemical Synthesis of ISGylated-Ubiquitin Hybrid Chain Assisted by Acetamidomethyl Derivatives with Dual Functions. ISG15, ULM
31  2020 Ub to no good: How cytomegaloviruses exploit the ubiquitin proteasome system. HCMV, MHC
32  2020 Ubiquitin chain-elongating enzyme UBE2S activates the RING E3 ligase APC/C for substrate priming. APC/C
33  2020 Ubiquitin Dynamics in Stem Cell Biology: Current Challenges and Perspectives. DUBs
34  2020 Ubiquitin stimulated reversal of topoisomerase 2 DNA-protein crosslinks by TDP2. TDP2, TOP2-DPCs
35  2020 UL36 Encoded by Marek's Disease Virus Exhibits Linkage-Specific Deubiquitinase Activity. DUB, MD, UBL
36  2019 A bacterial effector deubiquitinase specifically hydrolyses linear ubiquitin chains to inhibit host inflammatory signalling. polyUb
37  2019 A negative feedback mechanism links UBC gene expression to ubiquitin levels by affecting RNA splicing rather than transcription. ---
38  2019 A vital ubiquitin-conjugating enzyme CgUbe2g1 participated in regulation of immune response of Pacific oyster Crassostrea gigas. LPS, rCgUbe2g1
39  2019 A20: A multifunctional tool for regulating immunity and preventing disease. ---
40  2019 An activity-based probe developed by a sequential dehydroalanine formation strategy targets HECT E3 ubiquitin ligases. ABPs, Dha
41  2019 Artificially Linked Ubiquitin Dimers Characterised Structurally and Dynamically by NMR Spectroscopy. ---
42  2019 Assays for dissecting the in vitro enzymatic activity of yeast Ubc7. ER, ERAD, NE
43  2019 Bacterial pseudokinase catalyzes protein polyglutamylation to inhibit the SidE-family ubiquitin ligases. ATP
44  2019 Cellular Cullin RING Ubiquitin Ligases: Druggable Host Dependency Factors of Cytomegaloviruses. Cul, DDB1, HCMV
45  2019 Charge-mediated proteasome targeting. DPSs, REG
46  2019 Chemical Modifications of Globular Proteins Phototriggered by an Endogenous Photosensitizer. Ptr
47  2019 Chemokine signaling links cell-cycle progression and cilia formation for left-right symmetry breaking. CDK, DFCs, ERK, Foxj1a, KV, LR
48  2019 Crystal structure and activity-based labeling reveal the mechanisms for linkage-specific substrate recognition by deubiquitinase USP9X. ABPs, DUB
49  2019 Cullin-3/KCTD10 complex is essential for K27-polyubiquitination of EIF3D in human hepatocellular carcinoma HepG2 cells. CUL3, EIF3D
50  2019 De novo macrocyclic peptides that specifically modulate Lys48-linked ubiquitin chains. ---
51  2019 Deficiency of the autophagy gene ATG16L1 induces insulin resistance through KLHL9/KLHL13/CUL3-mediated IRS1 degradation. BioID, CUL3, IRS-1, MEF, MEFs
52  2019 Designing active RNF4 monomers by introducing a tryptophan: avidity towards E2∼Ub conjugates dictates the activity of ubiquitin RING E3 ligases. E3s
53  2019 Determining the molecular drivers of species-specific interferon-stimulated gene product 15 interactions with nairovirus ovarian tumor domain proteases. ISG15, OTU
54  2019 Deubiquitination of phosphoribosyl-ubiquitin conjugates by phosphodiesterase-domain-containing Legionella effectors. ---
55  2019 Development of a DUB-selective fluorogenic substrate. ABPs, DUBs
56  2019 Disruption of the polyubiquitin gene Ubb causes retinal degeneration in mice. KO
57  2019 Diubiquitin-Based NMR Analysis: Interactions Between Lys6-Linked diUb and UBA Domain of UBXN1. diUbs, UBA, UBDs
58  2019 Diverse fate of ubiquitin chain moieties: The proximal is degraded with the target, and the distal protects the proximal from removal and recycles. DUBs
59  2019 DNA Vaccine Targeting Gonadotropin-Releasing Hormone Receptor and Its Application in Animal Contraception. GnRHR
60  2019 DNP-Supported Solid-State NMR Spectroscopy of Proteins Inside Mammalian Cells. DNP
61  2019 Downhill Running Acutely Elicits Mitophagy in Rat Soleus Muscle. cox1, LC3, PINK1
62  2019 Dual-color pulse-chase ubiquitination assays to simultaneously monitor substrate priming and extension. ---
63  2019 Efficient Semi-Synthesis of Atypical Ubiquitin Chains and Ubiquitin-Based Probes Forged by Thioether Isopeptide Bonds. CAACU, DUB
64  2019 Emerging role of ubiquitin-specific protease 14 in oncogenesis and development of tumor: Therapeutic implication. DUBs, USP14
65  2019 Estrogen receptor alpha promotes Cav1.2 ubiquitination and degradation in neuronal cells and in APP/PS1 mice. ERalpha, LTCC, TRABID
66  2019 Exogenous ubiquitin reduces inflammatory response and preserves myocardial function 3 days post-ischemia-reperfusion injury. beta-AR, I/R, MMP
67  2019 Exploring the Functional Consequences of Protein Backbone Alteration in Ubiquitin through Native Chemical Ligation. ---
68  2019 Formation of the Alarmones Diadenosine Triphosphate and Tetraphosphate by Ubiquitin- and Ubiquitin-like-Activating Enzymes. UBL
69  2019 Genome-wide CRISPR Analysis Identifies Substrate-Specific Conjugation Modules in ER-Associated Degradation. ERAD, UPS
70  2019 High-affinity free ubiquitin sensors for quantifying ubiquitin homeostasis and deubiquitination. poly
71  2019 HIV-1 Impairment via UBE3A and HIV-1 Nef Interactions Utilizing the Ubiquitin Proteasome System. LTR
72  2019 How to Target Viral and Bacterial Effector Proteins Interfering with Ubiquitin Signaling. UBL
73  2019 Hybrid Chains: A Collaboration of Ubiquitin and Ubiquitin-Like Modifiers Introducing Cross-Functionality to the Ubiquitin Code. Ub-L
74  2019 Identification and Characterization of Mutations in Ubiquitin Required for Non-covalent Dimer Formation. UbVs
75  2019 Induction via Functional Protein Stabilization of Hepatic Cytochromes P450 upon gp78/Autocrine Motility Factor Receptor (AMFR) Ubiquitin E3-Ligase Genetic Ablation in Mice: Therapeutic and Toxicological Relevance. AMF, AMFR, DDIs, ER, ERAD
76  2019 Interaction of Vanadium(IV) Species with Ubiquitin: A Combined Instrumental and Computational Approach. acac, dhp, koj, ma, mim
77  2019 Molecular Functions of Rice Cytosol-Localized RING Finger Protein 1 in Response to Salt and Drought and Comparative Analysis of Its Grass Orthologs. OsCLR1, RING, WT
78  2019 N-terminal acetylation and the N-end rule pathway control degradation of the lipid droplet protein PLIN2. LD, PLIN2
79  2019 p62-mediated Selective autophagy endows virus-transformed cells with insusceptibility to DNA damage under oxidative stress. DDR, EBV, LCLs, ROS/RNS, shRNA
80  2019 Paralytic Shellfish Toxins and Ocean Warming: Bioaccumulation and Ecotoxicological Responses in Juvenile Gilthead Seabream (Sparus aurata). dcSTX, HABs, LPO, PST
81  2019 Posing the APC/C E3 Ubiquitin Ligase to Orchestrate Cell Division. APC/C
82  2019 Probing the impact of nairovirus genomic diversity on viral ovarian tumor domain protease (vOTU) structure and deubiquitinase activity. DUB, ISG15, vOTU, vOTU
83  2019 Profiling DUBs and Ubl-specific proteases with activity-based probes. ABPs, DUBs, UBLs
84  2019 Profiling Ubiquitin and Ubiquitin-like Dependent Post-translational Modifications and Identification of Significant Alterations. UBL
85  2019 Protein engineering of a ubiquitin-variant inhibitor of APC/C identifies a cryptic K48 ubiquitin chain binding site. APC/C, cryo-EM, UbVs
86  2019 Regulation of the Hippo signaling pathway by deubiquitinating enzymes in cancer. DUBs
87  2019 Remodeling Membrane Binding by Mono-Ubiquitylation. ---
88  2019 Research Progress on Plant RING-Finger Proteins. RING, UPS
89  2019 Rev1 plays central roles in mammalian DNA-damage tolerance in response to UV irradiation. CTD, PCNA, TLS
90  2019 Rpn10 promotes tumor progression by regulating hypoxia-inducible factor 1 alpha through the PTEN/Akt signaling pathway in hepatocellular carcinoma. HCC
91  2019 RYBP modulates stability and function of Ring1B through targeting UBE3A. nc-PRC1, RYBP, UBE3A
92  2019 Semisynthesis of Ubiquitin and SUMO-Rhodamine 110-Glycine through Aminolysis of Boc-Protected Thioester Counterparts. DUBs
93  2019 Semisynthesis of ubiquitinated histone H2B with a native or nonhydrolyzable linkage. ---
94  2019 Small molecule PROTACs in targeted therapy: An emerging strategy to induce protein degradation. PROTACs
95  2019 Stable Occupancy of the Crimean-Congo Hemorrhagic Fever Virus-Encoded Deubiquitinase Blocks Viral Infection. CCHFV, IFN, OTU
96  2019 Structural basis for adenylation and thioester bond formation in the ubiquitin E1. Ub-AVSN, Ubl
97  2019 Structural Basis for the Activation of the Deubiquitinase Calypso by the Polycomb Protein ASX. ---
98  2019 Structural basis for the recognition of K48-linked Ub chain by proteasomal receptor Rpn13. K48-diUb
99  2019 Structural basis of ubiquitin recognition by the winged-helix domain of Cockayne syndrome group B protein. DSBs, TCR, UBDs, WHD
100  2019 Structural insights into E1 recognition and the ubiquitin-conjugating activity of the E2 enzyme Cdc34. ---