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■ Abbreviation / Long Form : gDNA / genomic DNA

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Total Number of Papers: 352
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Abbreviation:   gDNA  (>> Co-occurring Abbreviation)
Long Form:   genomic DNA
 Abbreviation Variation
 Long Form Variation
 Pair(Abbreviation/Long Form) Variation
No. Year Title Co-occurring Abbreviation
2019 A Functional Polymorphism (rs6265, G>A) of Brain-Derived Neurotrophic Factor Gene and Breast Cancer: An Association Study. BC, BDNF, HWE, ORs, PCR-RFLP
2019 A large deletion spanning XG and GYG2 constitutes a genetic basis of the Xgnull phenotype, underlying anti-Xga production. cfDNA
2019 A Microfluidics Workflow for Sample Preparation for Next-Generation DNA Sequencing. ---
2019 A Nucleic Acid Quality Control Strategy for Frozen Tissues from a Biobank of High-Risk Pregnancy. CIT, CPAs, QC
2019 An attenuated Salmonella vaccine secreting Lawsonia intracellularis immunogenic antigens confers dual protection against porcine proliferative enteropathy and salmonellosis in a murine model. Ig, Lhly, LI, PPE, ST
2019 Chromatin Immunoprecipitation (ChIP) Protocols for the Cancer and Developmental Biology Laboratory. ChIP, qPCR
2019 Circulating Cell-Free DNA and RNA Analysis as Liquid Biopsy: Optimal Centrifugation Protocol. ddPCR, EDTA, qPCR
2019 Clinical utility of androgen receptor gene aberrations in circulating cell-free DNA as a biomarker for treatment of castration-resistant prostate cancer. AR, cfDNA, CN, CRPC, dPCR
2019 Co-evaluation of interaction parameters of genomic and plasmid DNA for a new chromatographic medium. APTMS, pDNA
10  2019 Coinfection with koala retrovirus subtypes A and B and its impact on captive koalas in Japanese zoos. KoRV, PBMCs
11  2019 Comprehensive analysis of EGFR T790M detection by ddPCR and ARMS-PCR and the effect of mutant abundance on the efficacy of osimertinib in NSCLC patients. 19del, ARMS, ctDNA, ddPCR, EGFR, NSCLC, PB, PFS, TKIs
12  2019 Current insights into fungal species diversity and perspective on naming the environmental DNA sequences of fungi. ---
13  2019 DNA Quality and Quantity Analysis of Camellia sinensis Through Processing from Fresh Leaves to a Green Tea Extract. bp, Ct, NHP, qPCR
14  2019 Down-regulated WDR35 contributes to fetal anomaly via regulation of osteogenic differentiation. AF-MSCs, AFC, CNV, SRP
15  2019 Efficient and High-Quality RNA Isolation from Metabolite-Rich Tissues of Stevia rebaudiana, an Important Commercial Crop. CTAB, RIN
16  2019 Engineering Tree Seasonal Cycles of Growth Through Chromatin Modification. ---
17  2019 Exome sequencing of family trios from the National Birth Defects Prevention Study: Tapping into a rich resource of genetic and environmental data. ES, NBDPS, WGA
18  2019 Genomewide Elucidation of Drug Resistance Mechanisms for Systemically Used Antifungal Drugs Amphotericin B, Caspofungin, and Voriconazole in the Budding Yeast. ---
19  2019 Genotyping of Single Nucleotide Polymorphisms Using Allele-Specific qPCR Producing Amplicons of Small Sizes Directly from Crude Serum Isolated from Capillary Blood by a Hand-Powered Paper Centrifuge. SNPs
20  2019 Identification of driver genes and somatic mutations in cell-free DNA of patients with pulmonary lymphangioleiomyomatosis. ---
21  2019 Interspecies DNA acquisition by a naturally competent Acinetobacter baumannii strain. CRKP
22  2019 Miniaturisation of high-throughput plasmid DNA library preparation for next-generation sequencing using multifactorial optimisation. DoE, NGS, QC
23  2019 Multiplex Droplet Digital PCR Assay for Quantification of Human T-Cell Leukemia Virus Type 1 Subtype c DNA Proviral Load and T Cells from Blood and Respiratory Exudates Sampled in a Remote Setting. ddPCR, HTLV-1, HTLV-1c, PBMCs, PVL
24  2019 Multiplex testing for Factor II and Factor V mutations in thrombophilia: technical verification and clinical validation of the cobas Factor II and Factor V test. ---
25  2019 Non-invasive mitochondrial DNA quantification on day 3 predicts blastocyst development: a prospective, blinded, multi-centric study. mtDNA
26  2019 Optimized Nuclear Pellet Method for Extracting Next-Generation Sequencing Quality Genomic DNA from Fresh Leaf Tissue. NGS, NP
27  2019 Peripheral Blood TCR Repertoire Profiling May Facilitate Patient Stratification for Immunotherapy against Melanoma. TCR
28  2019 Physical Mapping of Peroxidase Genes and Development of Functional Markers for TaPod-D1 on Bread Wheat Chromosome 7D. ANOVA, CS, del, Dt, FL, NT, POD, SNPs
29  2019 Resectable lung lesions malignancy assessment and cancer detection by ultra-deep sequencing of targeted gene mutations in plasma cell-free DNA. ct
30  2019 Short DNA Probes Developed for Sample Tracking and Quality Assurance in Gene PanelTesting. NGS
31  2019 Taraxacum kok-saghyz (rubber dandelion) genomic microsatellite loci reveal modest genetic diversity and cross-amplify broadly to related species. gSSRs, TKS
32  2019 The determination of human peripheral blood mononuclear cell counts using a genomic DNA standard and application in tenofovir diphosphate quantitation. TAF, TDF, TFV-DP
33  2019 The isolation and molecular characterization of cerebral microvessels. BBB
34  2019 Type II Restriction of Bacteriophage DNA With 5hmdU-Derived Base Modifications. MTases, putT, REases
35  2019 Vaginal microbiota profile at the time of embryo transfer does not affect live birth rate in IVF cycles with donated oocytes. ICSI
36  2018 A 3D-Printed Millifluidic Platform Enabling Bacterial Preconcentration and DNA Purification for Molecular Detection of Pathogens in Blood. Ab-MNPs, CFU, MSBs, PCR
37  2018 A minimum requirements method to isolate large quantities of highly purified DNA from one drop of poultry blood. PCR, RBCs, RFLP
38  2018 A Multicenter Study to Assess EGFR Mutational Status in Plasma: Focus on an Optimized Workflow for Liquid Biopsy in a Clinical Setting. ctDNA, ddPCR, EGFR, NSCLC
39  2018 An improved suppression subtractive hybridization technique to develop species-specific repetitive sequences from Erianthus arundinaceus (Saccharum complex). FISH, RDB, SSH
40  2018 An ultrasensitive electrochemical biosensor for the detection of mecA gene in methicillin-resistant Staphylococcus aureus. MRSA, MSP, TSP
41  2018 Assessment of DNA Contamination in RNA Samples Based on Ribosomal DNA. rDNA, RT-qPCR
42  2018 Cre-Recombinase Dependent Germline Deletion of a Conditional Allele in the Rgs9cre Mouse Line. GD
43  2018 Defining CRISPR-Cas9 genome-wide nuclease activities with CIRCLE-seq. CIRCLE-seq
44  2018 Denaturation-Enhanced Droplet Digital PCR for Liquid Biopsies. dddPCR, ddPCR
45  2018 Development of a Membrane-Based Method for Isolation of Genomic DNA from Human Blood. ---
46  2018 Development of nested multiplex polymerase chain reaction (PCR) assay for the detection of Toxocara canis, Toxocara cati and Ascaris suum contamination in meat and organ meats. PCR
47  2018 Direct colorimetric detection of unamplified pathogen DNA by dextrin-capped gold nanoparticles. ssDNAp
48  2018 DNA methylation profiling of genomic DNA isolated from urine in diabetic chronic kidney disease: A pilot study. ---
49  2018 Efficient Production and Identification of CRISPR/Cas9-generated Gene Knockouts in the Model System Danio rerio. Cas, CRISPR, DSB, HMA, NGS, sgRNA
50  2018 Endogenous single-strand DNA breaks at RNA polymerase II promoters in Saccharomyces cerevisiae. RNAPII
51  2018 Epigenetic Enhancer Marks and Transcription Factor Binding Influence Vkappa Gene Rearrangement in Pre-B Cells and Pro-B Cells. ---
52  2018 High-Throughput Miniaturized 16S rRNA Amplicon Library Preparation Reduces Costs while Preserving Microbiome Integrity. ---
53  2018 Identification of Homologous Recombination Events in Mouse Embryonic Stem Cells Using Southern Blotting and Polymerase Chain Reaction. ES, HR, NMHC IIs, RE
54  2018 Impact of DNA Sequencing and Analysis Methods on 16S rRNA Gene Bacterial Community Analysis of Dairy Products. ASVs, DADA2, OTUs, RDP
55  2018 Leukocytes as a reservoir of circulating oncogenic DNA and regulatory targets of tumor-derived extracellular vesicles. ddPCR, EVs, IL-8, NSs, RBCs, TAT, TF
56  2018 Magnetic nano fluids for isolation of genomic DNA and total RNA from various prokaryote and eukaryote cells. cDNA, CTAB, PCR, rRNA
57  2018 Microfluidic Device for Aptamer-Based Cancer Cell Capture and Genetic Mutation Detection. ---
58  2018 Monitoring of Parasite Kinetics in Indian Post-Kala-azar Dermal Leishmaniasis. IQR, L-AmB, PKDL, VL
59  2018 Mudskipper (Boleophthalmus pectinirostris) Hepcidin-1 and Hepcidin-2 Present Different Gene Expression Profile and Antibacterial Activity and Possess Distinct Protective Effect against Edwardsiella tarda Infection. ---
60  2018 Noninvasive prenatal test for FGFR3-related skeletal dysplasia based on next-generation sequencing and plasma cell-free DNA: Test performance analysis and feasibility exploration. ACH, FGFR3, NGS, TDI
61  2018 Normalization of cell associated antiretroviral drug concentrations with a novel RPP30 droplet digital PCR assay. ARV, ddPCR, NHP, PBMCs, RMC, TIMCs
62  2018 Potent O-antigen-deficient (rough) mutants of Salmonella Typhimurium secreting Lawsonia intracellularis antigens enhance immunogenicity and provide single-immunization protection against proliferative enteropathy and salmonellosis in a murine model. LI, PE, ST
63  2018 Protocol: a versatile, inexpensive, high-throughput plant genomic DNA extraction method suitable for genotyping-by-sequencing. GBS
64  2018 SNPs in the Toll1 receptor of Litopenaeus vannamei are associated with immune response. nsSNP, SNPs, TLRs, WSSV
65  2018 Systematic Bias Introduced by Genomic DNA Template Dilution in 16S rRNA Gene-Targeted Microbiota Profiling in Human Stool Homogenates. ---
66  2018 Targeted Next-Generation Sequencing for Detecting MLL Gene Fusions in Leukemia. AMP-E, FISH, LDI, MLL, NGS, TPG
67  2018 The DNA Methylome of the Hyperthermoacidophilic Crenarchaeon Sulfolobus acidocaldarius. m4C, m5C, m6A, SMRT
68  2018 The Implications of Fragmented Genomic DNA Size Range on the Hybridization Efficiency in NanoGene Assay. ---
69  2018 Tubular cell loss in early inv/nphp2 mutant kidneys represents a possible homeostatic mechanism in cortical tubular formation. BrdU, EdU, inv, PCP
70  2018 Use of coagulation factor XIII (F13) gene as an internal control for normalization of genomic DNA's for HLA typing. ---
71  2018 VIH from the mud crab is specifically expressed in the eyestalk and potentially regulated by transactivator of Sox9/Oct4/Oct1. CHH, VIH, VTG
72  2017 5-Hydroxymethylcytosine signatures in circulating cell-free DNA as diagnostic biomarkers for human cancers. 5hmC, 5mC, cfDNA
73  2017 A 5-mC Dot Blot Assay Quantifying the DNA Methylation Level of Chondrocyte Dedifferentiation In Vitro. HPLC
74  2017 Accurate Detection of Methicillin-Resistant Staphylococcus aureus in Mixtures by Use of Single-Bacterium Duplex Droplet Digital PCR. ddPCR, LOD, MRSA, MSSA
75  2017 An Insight into T-DNA Integration Events in Medicago sativa. T-DNA, VB
76  2017 Assessment of REPLI-g Multiple Displacement Whole Genome Amplification (WGA) Techniques for Metagenomic Applications. GC, MDA, MGRG, WGA
77  2017 Detection and Quantification of Toxin-Producing Microcystis aeruginosa Strain in Water by NanoGene Assay. M. aeruginosa
78  2017 DNA Methylome Profiling on the Infinium HumanMethylation450 Array from Limiting Quantities of Genomic DNA from a Single, Small Archived Bloodspot. ---
79  2017 Effects of storage temperature on the quantity and integrity of genomic DNA extracted from mice tissues: A comparison of recovery methods. ---
80  2017 Genome-wide screen for genes involved in eDNA release during biofilm formation by Staphylococcus aureus. eDNA
81  2017 High molecular weight genomic DNA mini-prep for filamentous fungi. ---
82  2017 High-resolution melting analysis for rapid and sensitive NOTCH1 screening in chronic lymphocytic leukemia. CLL, HRM, TAT
83  2017 Impact of FTO SNPs rs9930506 and rs9939609 in Prostate Cancer Severity in a Cohort of Puerto Rican Men. CI, OR, OR, ORs, PCa, RP
84  2017 Indications for cellular migration from the central nervous system to its draining lymph nodes in CD11c-GFP+ bone-marrow chimeras following EAE. APC, CLNs, CNS, DC, EAE, LNs, MS, Tg, WT
85  2017 Methodological considerations for detection of terrestrial small-body salamander eDNA and implications for biodiversity conservation. eDNA, qPCR
86  2017 Molecular characterization and functional analysis of chalcone synthase from Syringa oblata Lindl. in the flavonoid biosynthetic pathway. CHS, ORF, PCR, SoCHS
87  2017 Molecular characterization of MHC class IIB genes of sympatric Neotropical cichlids. cDNA, MHC
88  2017 Monitoring of Venus transgenic cell migration during pregnancy in non-transgenic rabbits. non-Tg, PBMCs, qPCR, Tg
89  2017 Multiplexed Single Intact Cell Droplet Digital PCR (MuSIC ddPCR) Method for Specific Detection of Enterohemorrhagic E. coli (EHEC) in Food Enrichment Cultures. EHEC, STEC, Stx
90  2017 Reading LINEs within the cocaine addicted brain. LINE, mPFC
91  2017 Selective Whole-Genome Amplification Is a Robust Method That Enables Scalable Whole-Genome Sequencing of Plasmodium vivax from Unprocessed Clinical Samples. SNP, SWGA, WGS
92  2017 Solution-Phase Exome Capture. ---
93  2017 Whole-Exomes Sequencing Delineates Gene Variants Profile in a Young Saudi Male with Familial Hypercholesterolemia: Case Report. FH, LDL, MI
94  2017 Within-Day Baseline Variation in Salivary Biomarkers in Healthy Men. CRP
95  2017 [High throughput-targeted sequencing panel for exploring radiosensitivity associated genes in esophageal squamous cell carcinoma]. BRAF, CYP2C19, ESCC, FN1, IPA, MLH1, PTCH1, SNV
96  2016 A PCR-based approach to assess genomic DNA contamination in RNA: Application to rat RNA samples. RT-qPCR
97  2016 A Rapid and Cost-Effective Method for Genotyping Genome-Edited Animals: A Heteroduplex Mobility Assay Using Microfluidic Capillary Electrophoresis. HD, KI, KO
98  2016 Absolute Quantification of Enterococcal 23S rRNA Gene Using Digital PCR. dPCR, qPCR, USEPA
99  2016 Collinearity of homoeologous group 3 chromosomes in the genus Hordeum and Secale cereale as revealed by 3H-derived FISH analysis. cDNA, FISH
100  2016 Comparison of whole-exome sequencing of matched fresh and formalin fixed paraffin embedded melanoma tumours: implications for clinical decision making. FFPE, WES