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Abbreviation : CE
Long Form : Combinatorial Extension
No. Year Title Co-occurring Abbreviation
2016 A Systematic Analysis of the Structures of Heterologously Expressed Proteins and Those from Their Native Hosts in the RCSB PDB Archive. PDB, RMSD
2016 [Homology modeling and eukaryotic expression of a modified alphabeta TCR harboring the immunoglobulin-like domain of gammadelta TCR]. CLSM, Ig, IRES, WT
2014 Cloud4Psi: cloud computing for 3D protein structure similarity searching. ---
2012 Homology Modeling of Coagulase in Staphylococcus aureus. BLAST, PDB
2010 Toward high-throughput, multicriteria protein-structure comparison and analysis. FAST, MaxCMO, MC-PSC, PSC, TMAlign, USM
2007 ProCKSI: a decision support system for Protein (structure) Comparison, Knowledge, Similarity and Information. FAST, MaxCMO, USM
2007 Protein structural similarity search by Ramachandran codes. ---
2005 Assigning new GO annotations to protein data bank sequences by combining structure and sequence homology. EBI, GO, GOA, PDB, SCOP
2005 Novel solution structure of porcine beta-microseminoprotein. CATH, DALI, MSPs
10  2005 Structural analysis of a set of proteins resulting from a bacterial genomics project. SGX
11  2004 A new scoring function and associated statistical significance for structure alignment by CE. SCOP
12  2004 CE-MC: a multiple protein structure alignment server. MC
13  2004 Sensitivity and selectivity in protein structure comparison. EPQ
14  2002 Building an automated classification of DNA-binding protein domains. PDB, PDP
15  2002 LigBase: a database of families of aligned ligand binding sites in known protein sequences and structures. PDB
16  2001 A database and tools for 3-D protein structure comparison and alignment using the Combinatorial Extension (CE) algorithm. ---
17  2001 CKAAPs DB: a conserved key amino acid positions database. CKAAPs DB
18  2001 Conserved key amino acid positions (CKAAPs) derived from the analysis of common substructures in proteins. CKAAPs
19  2000 An alternative view of protein fold space. RMSD
20  2000 Common EF-hand motifs in cholinesterases and neuroligins suggest a role for Ca2+ binding in cell surface associations. HMMs
21  1998 Protein structure alignment by incremental combinatorial extension (CE) of the optimal path. AFPs, PDB