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Total Number of Papers: 1022
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Abbreviation : GSEA
Long Form : gene set enrichment analysis
No. Year Title Co-occurring Abbreviation
2020 A genome-wide multiphenotypic association analysis identified common candidate genes for subjective well-being, depressive symptoms and neuroticism. MeQTL, rSNP, SWB
2020 A novel DNA damage response signature of IDH-mutant grade II and grade III astrocytoma at transcriptional level. CGGA, GO
2020 A risk signature with four autophagy-related genes for predicting survival of glioblastoma multiforme. GBM, HADb, LASSO, ROC
2020 A transcriptional co-expression network-based approach to identify prognostic biomarkers in gastric carcinoma. KEGG, MSI
2020 An integrated RNA-Seq and network study reveals the effect of nicotinamide on adrenal androgen synthesis. GO, KEGG, NAM
2020 Aneuploid IMR90 cells induced by depletion of pRB, DNMT1 and MAD2 show a common gene expression signature. PPI
2020 Application of Machine Learning in Developing a Novelty Five-Pseudogene Signature to Predict Prognosis of Head and Neck Squamous Cell Carcinoma: A New Aspect of "Junk Genes" in Biomedical Practice. HNSCC
2020 Biomarker expression analysis in different age groups revealed age was a risk factor for breast cancer. GEO, lncRNAs, mRNAs, WGCNA
2020 Biomarkers Associated with Atrial Fibrillation in Patients with Ischemic Stroke: A Pilot Study from the NOR-FIB Study. AF, AUC, CS, GDF, IL, LAA, RF, ROC, TIAs, U-PAR
10  2020 Carcinogenesis effects of E2F transcription factor 8 (E2F8) in hepatocellular carcinoma outcomes: an integrated bioinformatic report. AFP, AJCC, DSS, E2F8, GEO, HCC, OS, PBMC, PFS, RFS
11  2020 Circular RNA circ_0003204 inhibits proliferation, migration and tube formation of endothelial cell in atherosclerosis via miR-370-3p/TGFbetaR2/phosph-SMAD3 axis. circRNAs, ECs, EVs, FISH, HAECs, ncRNAs, RIP, UTR
12  2020 Clinical relevance of ARF/ARL family genes and oncogenic function of ARL4C in endometrial cancer. ARF, ARL
13  2020 Co-expression network analysis identified atypical chemokine receptor 1 (ACKR1) association with lymph node metastasis and prognosis in cervical cancer. ACKR1, CC, GEO, GEPIA, PPI, ROC, STRING
14  2020 Comprehensive Analysis of lncRNAs Associated with the Pathogenesis and Prognosis of Gastric Cancer. ceRNA, GC, GEO
15  2020 Comprehensive analysis of the association between tumor glycolysis and immune/inflammation function in breast cancer. GO, KEGG, PGK1, TILs
16  2020 Decreased expression of TXNIP predicts poor prognosis in patients with clear cell renal cell carcinoma. ccRCC, JAK, MAPK, TGF-beta, TXNIP
17  2020 Differentially expressed genes and key molecules of BRCA1/2-mutant breast cancer: evidence from bioinformatics analyses. DEGs, PPI
18  2020 Discovery of novel molecular characteristics and cellular biological properties in ameloblastoma. IGF2, NGS, TLR2
19  2020 Downregulation of NUSAP1 suppresses cell proliferation, migration, and invasion via inhibiting mTORC1 signalling pathway in gastric cancer. EMT, FPS, GC, GEO, NUSAP1
20  2020 EBF1 Gene mRNA Levels in Maternal Blood and Spontaneous Preterm Birth. FDR, sPTB
21  2020 EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients. ICGC, TMB
22  2020 Essential role of microglial transforming growth factor-beta1 in antidepressant actions of (R)-ketamine and the novel antidepressant TGF-beta1. CSDS, CSF1R, PFC, TGF
23  2020 Evaluating the Correlations Between Osteoporosis and Lifestyle-Related Factors Using Transcriptome-Wide Association Study. LDSC, OP, PB, TBBMD, TWAS, WB
24  2020 Exploiting MYC-induced PARPness to target genomic instability in multiple myeloma. Alt-NHEJ, DDR, GEP, MM, PARPi, PC
25  2020 Expression and prognostic value of long non-coding RNA H19 in glioma via integrated bioinformatics analyses. DEGs, GBM, GO, KEGG, LGG, lncRNAs
26  2020 Expression scoring of a small-nucleolar-RNA signature identified by machine learning serves as a prognostic predictor for head and neck cancer. HNSCC, snoRNAs
27  2020 FOXM1 functions collaboratively with PLAU to promote gastric cancer progression. GC
28  2020 Gene expression analysis of the cerebellar cortex in essential tremor. ER, ET, PC
29  2020 GTF2IRD1 on chromosome 7 is a novel oncogene regulating the tumor-suppressor gene TGFbetaR2 in colorectal cancer. Ch.7q, CRC, GTF2IRD1, RT-qPCR, TGFbetaR2
30  2020 High infiltration of mast cells is associated with improved response to adjuvant chemotherapy in gallbladder cancer. ACT, GBC, TIM, TMA
31  2020 High SPINK1 Expression Predicts Poor Prognosis and Promotes Cell Proliferation and Metastasis of Hepatocellular Carcinoma. HCC
32  2020 High ubiquitin conjugating enzyme E2 T mRNA expression and its prognostic significance in lung adenocarcinoma: A study based on the TCGA database. CI, HR, LUAD, OS, UBE2T
33  2020 Identification of Key Genes and Prognostic Analysis between Chromophobe Renal Cell Carcinoma and Renal Oncocytoma by Bioinformatic Analysis. ChRCC, DEGs, PPI, RO
34  2020 Identification of novel functions of the ROCK2-specific inhibitor KD025 by bioinformatics analysis. DEGs, ROCKs
35  2020 Identification of Novel lncRNA Markers in Glioblastoma Multiforme and Their Clinical Significance: A Study Based on Multiple Sequencing Data. ceRNA, DEGs, GBM, GTEx, lncRNAs, miRNAs, mRNAs, qPCR
36  2020 Integrative Gene Expression Profiling Analysis to Investigate Potential Prognostic Biomarkers for Colorectal Cancer. CRC, DEGs
37  2020 Integrative systematic review meta-analysis and bioinformatics identifies MicroRNA-21 and its target genes as biomarkers for colorectal adenocarcinoma. LIMMA, miRNAs
38  2020 Interstitial HIF1A induces an estimated glomerular filtration rate decline through potentiating renal fibrosis in diabetic nephropathy. CEBPD, DN, ECM, eGFR, HIF1A, VEGF-A, WGCNA
39  2020 ISG20 serves as a potential biomarker and drives tumor progression in clear cell renal cell carcinoma. ccRCC, WGCNA
40  2020 Knockdown of PLCB2 expression reduces melanoma cell viability and promotes melanoma cell apoptosis by altering Ras/Raf/MAPK signals. GEO, PLCB2, PPI
41  2020 Lmo3 deficiency in the mouse is associated with alterations in mood-related behaviors and a depression-biased amygdala transcriptome. BLA, Lmo3, LTP
42  2020 Long Non-coding RNA Expression Profiling in Biopsy to Identify Renal Allograft at Risk of Chronic Damage and Future Graft Loss. GEO, lncRNA
43  2020 Metabolic Pathways Enhancement Confers Poor Prognosis in p53 Exon Mutant Hepatocellular Carcinoma. ENO1, ES, HCC, HK2, NGS, SNVs
44  2020 Mitochondrial dysfunction and oxidative stress in bone marrow stromal cells induced by daunorubicin leads to DNA damage in hematopoietic cells. BM, DNR, GO, HSPCs
45  2020 Origin recognition complex subunit 1 regulates cell growth and metastasis in glioma by altering activation of ERK and JNK signaling pathway. GO, ORC1, PPI
46  2020 Pharmacological screening and transcriptomic functional analyses identify a synergistic interaction between dasatinib and olaparib in triple-negative breast cancer. TNBC
47  2020 Prognostic value of CLIC3 mRNA overexpression in bladder cancer. BC, CLIC3, ECM, GEO, GO, KEGG, qRT-PCR
48  2020 Protein tyrosine phosphatase 4A3 (PTP4A3/PRL-3) drives migration and progression of T-cell acute lymphoblastic leukemia in vitro and in vivo. RPPA, shRNA, T-ALL
49  2020 RNA expression and risk of venous thromboembolism in lung cancer. VTE
50  2020 RNA sequencing data of mouse 2-cell embryos treated with DMSO. GEO
51  2020 RNA-seq based transcriptome analysis of EHMT2 functions in breast cancer. GO, TNBC
52  2020 SLC34A2 simultaneously promotes papillary thyroid carcinoma growth and invasion through distinct mechanisms. CTTN, DNMT3B, PTC, SLC34A2
53  2020 TBX2 Identified as a Potential Predictor of Bone Metastasis in Lung Adenocarcinoma via Integrated Bioinformatics Analyses and Verification of Functional Assay. DEGs, EMT, LAC
54  2020 The Clinical Significance of PPEF1 as a Promising Biomarker and Its Potential Mechanism in Breast Cancer. AE-free, BC, ELISA, GO, IHC, MR-free, OS, PPI
55  2020 Transcriptional Expression in Human Periodontal Ligament Cells Subjected to Orthodontic Force: An RNA-Sequencing Study. DEG, PDL
56  2020 Transcriptomic changes in the nasal epithelium associated with diesel engine exhaust exposure. DEE
57  2020 TRIAP1 knockdown sensitizes non-small cell lung cancer to ionizing radiation by disrupting redox homeostasis. GLRX, NSCLC, PRDX, TRIAP1, TXN
58  2020 Twenty Metabolic Genes Based Signature Predicts Survival of Glioma Patients. KEGG
59  2020 VGLL3 is a prognostic biomarker and correlated with clinical pathologic features and immune infiltrates in stomach adenocarcinoma. STAD
60  2019 A 5-Gene Prognostic Combination for Predicting Survival of Patients with Gastric Cancer. GC, OS, RSF
61  2019 A four-gene signature-derived risk score for glioblastoma: prospects for prognostic and response predictive analyses. DEGs, GBM
62  2019 A gene expression signature-based nomogram model in prediction of breast cancer bone metastases. BCBM, GESBN, SREs
63  2019 A long non-coding RNA signature to improve prognostic prediction in clear cell renal cell carcinoma. ccRCC, lncRNAs, OS
64  2019 A longitudinal study highlights shared aspects of the transcriptomic response to cardiogenic and septic shock. CEBPB, CS, PRRs, SC, SS
65  2019 A novel 4-gene signature for overall survival prediction in lung adenocarcinoma patients with lymph node metastasis. GEO, LNM, LUAD, tROC
66  2019 A Novel Prognostic Signature of Transcription Factors for the Prediction in Patients With GBM. EMT, GBM, GO, KEGG, NMF, PI3K, ROC, TFs
67  2019 A novel risk score system for assessment of ovarian cancer based on co-expression network analysis and expression level of five lncRNAs. lncRNAs, OC, WGCNA
68  2019 A positive feedback between IDO1 metabolite and COL12A1 via MAPK pathway to promote gastric cancer metastasis. CCLE, GC, WGCNA
69  2019 A preliminary investigation of circulating extracellular vesicles and biomarker discovery associated with treatment response in head and neck squamous cell carcinoma. AV, CRT, CTB, EVs, HNSCC, STRING
70  2019 A robust 6-mRNA signature for prognosis prediction of pancreatic ductal adenocarcinoma. GEO, LASSO, OS, PDAC, ROC
71  2019 A seven-miRNA expression-based prognostic signature and its corresponding potential competing endogenous RNA network in early pancreatic cancer. ceRNAs, PC
72  2019 Aberrant expression of CHL1 gene and long non-coding RNA CHL1-AS1, CHL1-AS2 in ovarian endometriosis. EC, EM, EU, IHC, lncRNAs, NE, qPCR
73  2019 Aberrant FAM64A mRNA expression is an independent predictor of poor survival in pancreatic cancer. OS, RFS, ROC
74  2019 Aberrant transcriptomes and DNA methylomes define pathways that drive pathogenesis and loss of brain laterality/asymmetry in schizophrenia and bipolar disorder. BD, DNAm, SCZ
75  2019 ADAM17 promotes lymph node metastasis in gastric cancer via activation of the Notch and Wnt signaling pathways. ADAMs
76  2019 Aldehyde dehydrogenase-2 acts as a potential genetic target for renal fibrosis. ALDH2, DEGs, GEO, IRI, KEGG, PPI, UUO
77  2019 Altered Gene Expression in Dioxin-Like and Non-Dioxin-Like PCB Exposed Peripheral Blood Mononuclear Cells. DL, NDL, PBMCs, PCBs
78  2019 Analysis of the long non-coding RNA LINC01614 in non-small cell lung cancer. lncRNA, NSCLC, NTL
79  2019 Analysis of Transcriptome, Selected Intracellular Signaling Pathways, Proliferation and Apoptosis of LNCaP Cells Exposed to High Leptin Concentrations. DEGs, MMP7, RTCA
80  2019 Apolipoprotein C1 (APOC1) promotes tumor progression via MAPK signaling pathways in colorectal cancer. APOC1, CRC, IHC, MAPK, siRNA
81  2019 ARHGAP25: A negative regulator of colorectal cancer (CRC) metastasis via the Wnt/beta-catenin pathway. CRC
82  2019 ARL3 is downregulated and acts as a prognostic biomarker in glioma. CGGA, GO, GSVA, REMBRANDT
83  2019 ARNTL hypermethylation promotes tumorigenesis and inhibits cisplatin sensitivity by activating CDK5 transcription in nasopharyngeal carcinoma. ARNTL, Cdk5, NPC
84  2019 Assessing the therapeutic potential of Graptopetalum paraguayense on Alzheimer's disease using patient iPSC-derived neurons. AD, GP, iPSC
85  2019 AURKB: a promising biomarker in clear cell renal cell carcinoma. AURKB, ccRCC
86  2019 Bioinformatics approach reveals the critical role of TGF-beta signaling pathway in pre-eclampsia development. CCK-8, DAVID, HUVECs, PPI, STRING, TGF
87  2019 Bioinformatics profiling utilized a nine immune-related long noncoding RNA signature as a prognostic target for pancreatic cancer. AUC, lncRNA, OS, PCA, ROC curve
88  2019 Cancer genetic markers according to radiotherapeutic response in patients with primary glioblastoma - Radiogenomic approach for precision medicine. GB, PD, RANO, RT
89  2019 Candesartan Neuroprotection in Rat Primary Neurons Negatively Correlates with Aging and Senescence: a Transcriptomic Analysis. ---
90  2019 CDK6 inhibits lymphoid cell infiltration and represents a prognostic marker in HPV+ squamous cell carcinoma of head and neck. CNVs, HNSCC, HPV, OS, TIMER
91  2019 CELSR3 mRNA expression is increased in hepatocellular carcinoma and indicates poor prognosis. CCLE, CELSR3, GEO, HCC, ROC
92  2019 CeRNA network analysis and functional enrichment of salt sensitivity of blood pressure by weighted-gene co-expression analysis. ceRNA, HDL, LDL, SSBP, TC, TG, WGCNA
93  2019 Characterization of lncRNA-miRNA-mRNA Network to Reveal Potential Functional ceRNAs in Bovine Skeletal Muscle. GO
94  2019 Clinical implications of a novel prognostic factor AIFM3 in breast cancer patients. AIFM3, BC, DFS, IHC, MOE, OS
95  2019 Clinical implications of ALDH1A1 and ALDH1A3 mRNA expression in melanoma subtypes. ALDH
96  2019 Clinical Significance of TRMT6 in Hepatocellular Carcinoma: A Bioinformatics-Based Study. HCC, OS, RFS
97  2019 Clinical Value of lncRNA LUCAT1 Expression in Liver Cancer and its Potential Pathways. ceRNA, lncRNAs, LUCAT1
98  2019 Clinically Relevant Biomarker Discovery in High-Risk Recurrent Neuroblastoma. LASSO, lncRNAs, PcG, PLS-DA
99  2019 Clinicopathological and biomolecular characteristics of stage IIB/IIC and stage IIIA colon cancer: Insight into the survival paradox. ---
100  2019 Co-expression network analysis identified KIF2C in association with progression and prognosis in lung adenocarcinoma. LUAD, NSCLC