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Abbreviation : InDel
Long Form : insertion/deletion
No. Year Title Co-occurring Abbreviation
2020 Genome-Wide Identification of QTLs for Grain Protein Content Based on Genotyping-by-Resequencing and Verification of qGPC1-1 in Rice. GPC, KND, NIRS, RIL, SSR
2020 InDels within caprine IGF2BP1 intron 2 and the 3'-untranslated regions are associated with goat growth traits. FGFR1, IGF2BP1
2020 Map-based cloning of qBWT-c12 discovered brassinosteroid-mediated control of organ size in cotton. b.wt, BR
2019 A novel duplicated insertion/deletion (InDel) of the CPT1a gene and its effects on growth traits in goat. CPT1a
2019 A rice gene, OsPL, encoding a MYB family transcription factor confers anthocyanin synthesis, heat stress response and hormonal signaling. ABA, CAT, EMS, IAA, JA, MDA, pl, SOD, TSS, WT
2019 An innovative panel containing a set of insertion/deletion loci for individual identification and its forensic efficiency evaluations in Chinese Hui ethnic minority. ---
2019 Assessing trait contribution and mapping novel QTL for salinity tolerance using the Bangladeshi rice landrace Capsule. QTL, SES, SSR
2019 Association and in silico investigations of miR-302c insertion/deletion variant as a novel biomarker with susceptibility to gastric cancer. ARMS-PCR, CI, GC, miR-302c, OR
2019 Association Genetics Identifies Single Nucleotide Polymorphisms Related to Kernel Oil Content and Quality in Camellia oleifera. LD, SNPs
10  2019 B-class MADS-box TM6 is a candidate gene for tomato male sterile-1526. dCAPS, ms-1526
11  2019 Cloning and characterization of special HMW glutenin subunit genes from Aegilops longissima L. and their potential for wheat quality improvement. aa, AS-PCR, HMW-GS, SNP
12  2019 Comparative transcriptomics analysis uncovers alternative splicing events and molecular markers in cabbage (Brassica oleracea L.). A3SS, AS, SNP
13  2019 Data on the polymorphic sites in the chloroplast genomes of the sunflower alloplasmic CMS lines. CMS, SNP, SSR
14  2019 Development and Application of InDel Markers for Authentication of the Korean Herbs Zanthoxylum schinifolium and Zanthoxylum piperitum. NCBI
15  2019 Development of a novel multiplex polymerase chain reaction system for forensic individual identification using insertion/deletion polymorphisms. ---
16  2019 Diversity of ATM gene variants: a population-based genome data analysis for precision medicine. AT, ATM, SNV
17  2019 Genetic diversity of Indo-China rice varieties using ISSR, SRAP and InDel markers. ISSR, SRAP
18  2019 Genetic effects of FTO gene insertion/deletion (InDel) on fat-tail measurements and growth traits in Tong sheep. FTO
19  2019 Genome-wide identification of ZmHMAs and association of natural variation in ZmHMA2 and ZmHMA3 with leaf cadmium accumulation in maize. Cd, HMAs, SNPs
20  2019 Genomic Analyses Provide Insights Into the Evolutionary History and Genetic Diversity of Auricularia Species. MYA, SSR
21  2019 Germline Predisposition and Copy Number Alteration in Pre-stage Lung Adenocarcinomas Presenting as Ground-Glass Nodules. CNV, SM-GGNs, SNV, TRS, WES
22  2019 IDSSR: An Efficient Pipeline for Identifying Polymorphic Microsatellites from a Single Genome Sequence. SSRs
23  2019 InDel Marker Based Estimation of Multi-Gene Allele Contribution and Genetic Variations for Grain Size and Weight in Rice (Oryza sativa L.). GL, GT, GW, PCoA, TGW, UPGMA
24  2019 Inheritance Pattern and Molecular Markers for Resistance to Blackleg Disease in Cabbage. HRM, SNPs
25  2019 Introgression of peanut smut resistance from landraces to elite peanut cultivars (Arachis hypogaea L.). RILs, SSRs
26  2019 Marker Assisted Selection in Sorghum Using KASP Assay for the Detection of Single Nucleotide Polymorphism/Insertion Deletion. MAS, PCR, SNP
27  2019 Population genetic analysis of 30 insertion-deletion (INDEL) loci in a Qinghai Tibetan group using the Investigator DIPplex Kit. ---
28  2019 Population genetics, diversity and forensic characteristics of Tai-Kadai-speaking Bouyei revealed by insertion/deletions markers. ---
29  2019 Rapid DNA-genotyping system targeting ten loci for resistance to blast disease in rice. SNP
30  2019 Targeted enrichment by solution-based hybrid capture to identify genetic sequence variants in barley. KASP, SNPs
31  2019 Undesired fertility restoration in msm1 barley associates with two mTERF genes. CMS, mTERF
32  2018 A Novel F3' 5' H Allele with 14 bp Deletion Is Associated with High Catechin Index Trait of Wild Tea Plants and Has Potential Use in Enhancing Tea Quality. DIC, F3' 5' H, TRIC
33  2018 A set of autosomal multiple InDel markers for forensic application and population genetic analysis in the Chinese Xinjiang Hui group. SNPs
34  2018 Development of an InDel polymorphism database for jute via comparative transcriptome analysis. ---
35  2018 Differential gene expression analysis and SNP/InDel marker discovery in resistant wild Asparagus kiusianus and susceptible A. officinalis in response to Phomopsis asparagi infection. 24 and 48 hpi, DGE, SNP
36  2018 Donor white blood cell survival and cytokine profiles following red blood cell transfusion in Australian major trauma patients. ISS, RBC, TAM
37  2018 Genomic and Transcriptomic Analysis Identified Gene Clusters and Candidate Genes for Oil Content in Peanut (Arachis hypogaea L.). DEGs
38  2018 Gummy Stem Blight Resistance in Melon: Inheritance Pattern and Development of Molecular Markers. GSB, NBS-LRR
39  2018 Human leucocyte antigen-G 14-bp InDel polymorphism and oral squamous cell carcinoma risk in Chinese Han population: A case-control study. 3'-UTR, AUC, CI, HLA-G, OR, OSCC, ROC, sHLA-G
40  2018 Identification of Novel Somatic TP53 Mutations in Patients with High-Grade Serous Ovarian Cancer (HGSOC) Using Next-Generation Sequencing (NGS). HGSOC, NGS
41  2018 INDEL Length and Haplotypes in the beta-Synuclein Gene: A Key to Differentiate Dementia with Lewy Bodies? AD, DLB, LBD, PD
42  2018 Influence of correlation between HLA-G polymorphism and Interleukin-6 (IL6) gene expression on the risk of schizophrenia. HLA-G, IL-6
43  2018 qSE7 is a major quantitative trait locus (QTL) influencing stigma exsertion rate in rice (Oryza sativa L.). CSSLs, MAS, QTL, XQZB, ZH9308
44  2017 A mixture detection method based on separate amplification using primer specific alleles of INDELs-a study based on two person's DNA mixture. MAF
45  2017 Association of insertion-deletions polymorphisms with colorectal cancer risk and clinical features. CRC, TNM
46  2017 Barcode System for Genetic Identification of Soybean [Glycine max (L.) Merrill] Cultivars Using InDel Markers Specific to Dense Variation Blocks. dVB
47  2017 Comparative transcriptomics uncovers alternative splicing and molecular marker development in radish (Raphanus sativus L.). AS, IR, SNP
48  2017 Development of novel InDel markers and genetic diversity in Chenopodium quinoa through whole-genome re-sequencing. AMOVA, kb, Mb, SNPs, SSR
49  2017 Optimized detection of insertions/deletions (INDELs) in whole-exome sequencing data. InDels, NGS, WES
50  2017 QTL Mapping by Whole Genome Re-sequencing and Analysis of Candidate Genes for Nitrogen Use Efficiency in Rice. BSA, NUE, QTL, SNPs, WGS
51  2017 Targeted deep sequencing of flowering regulators in Brassica napus reveals extensive copy number variation. CNV, SNPs
52  2017 Whole Genome Sequence Identified a Rare Homozygous Pathogenic Mutation of the DSG2 Gene in a Familial Arrhythmogenic Cardiomyopathy Involving Both Ventricles. SNP, WGS
53  2016 A fast and simple method for detecting and quantifying donor-derived cell-free DNA in sera of solid organ transplant recipients as a biomarker for graft function. cfDNA, HLA, qPCR
54  2016 A naturally occurring promoter polymorphism of the Arabidopsis FUM2 gene causes expression variation, and is associated with metabolic and growth traits. ---
55  2016 A New Glabrous Gene (csgl3) Identified in Trichome Development in Cucumber (Cucumis sativus L.). BAS, dCAPS, MAS, SSR
56  2016 Analysis of optimal alignments unfolds aligners' bias in existing variant profiles. ---
57  2016 Analysis of the genetic ancestry of patients with oral clefts from South American admixed populations. CLP, CP
58  2016 Application of the CRISPR/Cas9 gene editing technique to research on functional genomes of parasites. CRISPR
59  2016 Candidate Gene Sequence Analyses toward Identifying -Type Resistance to. NB-LRR
60  2016 Characteristic and inheritance analysis of targeted mutagenesis mediated by genome editing in rice. DSBs, TALEN
61  2016 Construction of a genetic linkage map and analysis of quantitative trait loci associated with the agronomically important traits of Pleurotus eryngii. CIM, LGs, LOD, MAS, QTL, SSR
62  2016 Development and validation of an ultra-high sensitive next-generation sequencing assay for molecular diagnosis of clinical oncology. ARMS, FFPE, MAF, NCP, NGS, SNV
63  2016 Enhanced Rice Blast Resistance by CRISPR/Cas9-Targeted Mutagenesis of the ERF Transcription Factor Gene OsERF922. SSNs
64  2016 Evaluation of insertion-deletion markers suitable for genetic diversity studies and marker-trait correlation analyses in cultivated peanut (Arachis hypogaea L.). NJ
65  2016 Genetic dissection of fruiting body-related traits using quantitative trait loci mapping in Lentinula edodes. CIs, FBRTs, MQTL
66  2016 Identification of a stable major-effect QTL (Parth 2.1) controlling parthenocarpy in cucumber and associated candidate gene analysis via whole genome re-sequencing. LOD, MAS, Parth2.1, PVE, RHL97-5, SSR
67  2016 Isolation and molecular characterization of porcine epidemic diarrhea viruses collected in Japan in 2014. PED, PEDV
68  2016 mInDel: a high-throughput and efficient pipeline for genome-wide InDel marker development. NGS
69  2016 Population Differentiations and Phylogenetic Analysis of Tibet and Qinghai Tibetan Groups Based on 30 InDel Loci. ---
70  2016 QTL analysis for chalkiness of rice and fine mapping of a candidate gene for qACE9. AAC, ACE, RILs, SEM
71  2016 The impact of HLA-G 3' UTR variants and sHLA-G on risk and clinical correlates of schizophrenia. CGI, HLA, MHC, sHLA-G
72  2016 Thirty autosomal insertion-deletion polymorphisms analyzed using the Investigator DIPplex Kit in populations from Iraq, Lithuania, Slovenia, and Turkey. ---
73  2016 Underlying Mechanisms of Zymographic Diversity in Starch Synthase I and Pullulanase in Rice-Developing Endosperm. AGPase, BEs, DBEs, PUL, SSI, SSs
74  2016 Using high-throughput sequencing transcriptome data for INDEL detection: challenges for cancer drug discovery. ---
75  2015 14-bp Insertion/Deletion Polymorphism of the HLA-G gene in Breast Cancer among Women from North Western Iran. HLA-G
76  2015 A multiplex panel of short-amplicon insertion-deletion DNA polymorphisms for forensic analysis. ---
77  2015 Amerindian genetic ancestry and INDEL polymorphisms associated with susceptibility of childhood B-cell Leukemia in an admixed population from the Brazilian Amazon. ALL
78  2015 An integrated approach for analyzing clinical genomic variant data from next-generation sequencing. CNV, NGS, SNP, WES
79  2015 BreakSeek: a breakpoint-based algorithm for full spectral range INDEL detection. ---
80  2015 De novo assembly and characterization of the spleen transcriptome of common carp (Cyprinus carpio) using Illumina paired-end sequencing. SNP, SSRs
81  2015 Detection of 40 bp insertion-deletion (INDEL) in mitochondrial control region among sambar (Rusa unicolor) populations in India. mtDNA
82  2015 Development and Utilization of InDel Markers to Identify Peanut (Arachis hypogaea) Disease Resistance. MAS, PIC, TSWV
83  2015 Development of genome-wide insertion/deletion markers in rice based on graphic pipeline platform. AGA-pipe, NGS-pipe, PCR
84  2015 Development of INDEL Markers for Genetic Mapping Based on Whole Genome Resequencing in Soybean. ---
85  2015 Enrichment of an intraspecific genetic map of upland cotton by developing markers using parental RAD sequencing. SNP
86  2015 Genome-wide insertion-deletion (InDel) marker discovery and genotyping for genomics-assisted breeding applications in chickpea. ---
87  2015 Population genetic analysis of insertion-deletion polymorphisms in a Brazilian population using the Investigator DIPplex kit. CDP, CMP, CPE
88  2015 QTL Analysis of Head Splitting Resistance in Cabbage (Brassica oleracea L. var. capitata) Using SSR and InDel Makers Based on Whole-Genome Re-Sequencing. DH, HSR, Htd, Hvd, Hw, SSR
89  2015 Recent insertion/deletion (reINDEL) mutations: increasing awareness to boost molecular-based research in ecology and evolution. reINDEL, reINDEL
90  2015 Single nucleotide polymorphisms in the bovine Histophilus somni genome; a comparison of new and old isolates. SNPs
91  2015 The developmental transcriptome landscape of bovine skeletal muscle defined by Ribo-Zero ribonucleic acid sequencing. RNA-Seq
92  2015 Use of multi-InDels as novel markers to analyze 13 X-chromosome haplotype loci for forensic purposes. ---
93  2014 A novel tri-allelic insertion/deletion polymorphism in the promoter of p21(Waf1/Cip1) and the association with gastric cancer. CIs, GC, ORs
94  2014 A whole-genome SNP array (RICE6K) for genomic breeding in rice. SNP
95  2014 An integrated genetic map based on four mapping populations and quantitative trait loci associated with economically important traits in watermelon (Citrullus lanatus). MAS, QTL, SNP, SSR, SV
96  2014 Characterization of 114 insertion/deletion (INDEL) polymorphisms, and selection for a global INDEL panel for human identification. HID, HWE, InDels
97  2014 Characterization of Rice Blast Resistance Gene Pi61(t) in Rice Germplasm. RIL
98  2014 Constructing a new integrated genetic linkage map and mapping quantitative trait loci for vegetative mycelium growth rate in Lentinula edodes. LGs, MAS, MAT-A, SRAP, SSIs, TRAP
99  2014 De novo transcriptome sequencing of the snail Echinolittorina malaccana: identification of genes responsive to thermal stress and development of genetic markers for population studies. SNP, SSRs
100  2014 Genetic analysis and molecular characterization of Chinese sesame (Sesamum indicum L.) cultivars using insertion-deletion (InDel) and simple sequence repeat (SSR) markers. AMOVA, PCA, SSR