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Abbreviation : TR
Long Form : tandem repeat
No. Year Title Co-occurring Abbreviation
2020 Comparative chloroplast genomics of the genus Taxodium. cp, IR, SNPs
2020 Identification of a genome-specific repetitive element in the Gossypium D genome. AADD, CS, FISH
2019 A novel tandem repeat cloning technique for creation of multiple short peptide repeats to differentiate closely related antigens. aa, SEB, SEC
2019 A Tumor-Selective Monoclonal Antibody from Immunization with a Tumor-Associated Mucin Glycopeptide. TACA
2019 AtrR Is an Essential Determinant of Azole Resistance in Aspergillus fumigatus. ATRE, ChIP-seq
2019 Physical location of tandem repeats in the wheat genome and application for chromosome identification. FISH, TRF, TRs
2019 Profiling the genome-wide landscape of tandem repeat expansions. NGS
2018 A Census of Tandemly Repeated Polymorphic Loci in Genic Regions Through the Comparative Integration of Human Genome Assemblies. PTR, STR, VNTR
2018 A meta-analysis of data associating DRD4 gene polymorphisms with schizophrenia. CI, OR, VNTR
10  2018 A simple method to detect the tandem repeat of the cyp51A promoter in azole-resistant strains of Aspergillus fumigatus. ---
11  2018 Annotation resource of tandem repeat-containing secretory proteins in sixty fungi. ---
12  2018 Axed MUC4 (MUC4/X) aggravates pancreatic malignant phenotype by activating integrin-beta1/FAK/ERK pathway. ECM, MUC4, PC, WT-MUC4
13  2018 Biological Roles of Protein-Coding Tandem Repeats in the Yeast Candida Albicans. ---
14  2018 Centromeric retrotransposons and centromere function. ---
15  2018 Ehrlichia chaffeensis TRP120 nucleomodulin binds DNA with disordered tandem repeat domain. CD, NMR, TRP120
16  2018 Genome-wide identification, putative functionality and interactions between lncRNAs and miRNAs in Brassica species. ncRNA
17  2018 Genotyping Mycoplasma synoviae: Development of a multi-locus variable number of tandem-repeats analysis and comparison with current molecular typing methods. MLST, MLVA
18  2018 Intraspecific and intraorganismal copy number dynamics of retrotransposons and tandem repeat in Aegilops speltoides Tausch (Poaceae, Triticeae). TE
19  2018 Mouse chromocenters DNA content: sequencing and in silico analysis. ChrmC, FISH
20  2018 RepeatsDB-lite: a web server for unit annotation of tandem repeat proteins. ---
21  2018 Two different genogroups of Ehrlichia canis from dogs in Thailand using immunodominant protein genes. CME
22  2017 Dual Role of the Extracellular Domain of Human Mucin MUC1 in Metastasis. IR
23  2016 A novel multilocus variable number tandem repeat analysis typing scheme for African phylotype III strains of the Ralstonia solanacearum species complex. MLST, MLVA, RSSC
24  2016 Detection of genotype-specific Ehrlichia canis exposure in Brazilian dogs by TRP36 peptide ELISA. BR
26  2016 Heterochromatic Tandem Repeats in the Extracellular DNA. ecDNA
27  2016 Identification of repetitive units in protein structures with ReUPred. ReUPred, SRUL
28  2016 LINE-related component of mouse heterochromatin and complex chromocenters' composition. FISH, LINEs, UTR
29  2016 Molecular basis of antibody binding to mucin glycopeptides in lung cancer. CDRs
30  2016 Multi-epitope proteins for improved serological detection of Trypanosoma cruzi infection and Chagas Disease. ---
31  2016 Sensitisation of an Azole-Resistant Aspergillus fumigatus Strain containing the Cyp51A-Related Mutation by Deleting the SrbA Gene. ---
32  2015 Comparison of protein repeat classifications based on structure and sequence families. LRRs
33  2015 Complete mitochondrial genome of Anadara vellicata (Bivalvia: Arcidae): A unique gene order and large atypical non-coding region. mt, NCR, PCGs, rRNA, T-stretch, tRNAs
34  2015 Genomic Context of Azole Resistance Mutations in Aspergillus fumigatus Determined Using Whole-Genome Sequencing. SNP, WGS
35  2015 Genotyping of Salmonella enterica serovar Typhimurium isolates by multilocus variable number of tandem repeat high-resolution melting analysis (MLV-HRMA). MLV-HRMA, MLV-HRMA, MLVA, Salmonella Typhimurium
36  2015 Prognostic implications of thymidylate synthase gene polymorphisms in patients with advanced small bowel adenocarcinoma treated with first-line fluoropyrimidine-based chemotherapy. HR, OS, PFS, SBA, SNPs, TS
37  2015 Tandem repeat recombinant proteins as potential antigens for the sero-diagnosis of Schistosoma mansoni infection. SEA, SWAP
38  2014 Multiplex variable number of tandem repeats for Oenococcus oeni and applications. FLA, VNTR
39  2013 A software tool for the selection of tandem repeats for MLVA analysis. MLVA, PCR
40  2013 Breakthrough pulmonary Aspergillus fumigatus infection with multiple triazole resistance in a Spanish patient with chronic myeloid leukemia. allo-HCT, BAL, GVHD
41  2013 Distinct mutational behaviors differentiate short tandem repeats from microsatellites in the human genome. MS, STRs
42  2013 Identification of mucins by using a method involving a combination of on-membrane chemical deglycosylation and immunostaining. SMME
43  2013 Microgeographical differences of Plasmodium vivax relapse and re-infection in the Peruvian Amazon. CI, OR
44  2012 An unusual glycoform of human salivary mucin MG2. ---
45  2012 Assessing the genome-wide effect of promoter region tandem repeat natural variation on gene expression. ---
46  2012 Development of novel PCR assays to detect azole resistance-mediating mutations of the Aspergillus fumigatus cyp51A gene in primary clinical samples from neutropenic patients. IA
47  2012 Highly discriminatory typing method for Listeria monocytogenes using polymorphic tandem repeat regions. MLTSA
48  2012 Tandem repeat protein as potential diagnostic antigen for Trypanosoma evansi infection. rTbbGM6, TbbGM6, TcoGM6, TeGM6
49  2012 Variability of the tandem repeat region of the Escherichia coli tolA gene. CAT
50  2012 Variation of intragenic tandem repeat tract of tolA modulates Escherichia coli stress tolerance. ---
51  2011 Aspergillus species and other molds in respiratory samples from patients with cystic fibrosis: a laboratory-based study with focus on Aspergillus fumigatus azole resistance. CF
52  2011 Biased cellular locations of tandem repeat antigens in African trypanosomes. ---
53  2011 Ehrlichia chaffeensis TRP120 interacts with a diverse array of eukaryotic proteins involved in transcription, signaling, and cytoskeleton organization. ACTG1, GGA1, IGL, PCGF5, TRP120, UNC13D
54  2011 High-frequency triazole resistance found In nonculturable Aspergillus fumigatus from lungs of patients with chronic fungal disease. BAL, CPA, PCR, SNPs
55  2011 Recombinant plant-expressed tumour-associated MUC1 peptide is immunogenic and capable of breaking tolerance in MUC1.Tg mice. ---
56  2011 Serological characterizations of tandem repeat proteins for detection of African trypanosome infection in cattle. ---
57  2011 Tandemly repeated DNA families in the mouse genome. WGS
58  2011 The structure-function relationship of the Aspergillus fumigatuscyp51A L98H conversion by site-directed mutagenesis: the mechanism of L98H azole resistance. L98H, MAR
59  2011 TS gene tandem repeats in esophageal cancer patients receiving chemoradiotherapy. 5-FU, CDDP, ESCC, TS
60  2011 Tyrosine-phosphorylated Ehrlichia chaffeensis and Ehrlichia canis tandem repeat orthologs contain a major continuous cross-reactive antibody epitope in lysine-rich repeats. TRP
61  2010 Analysis of a cholera toxin B subunit (CTB) and human mucin 1 (MUC1) conjugate protein in a MUC1-tolerant mouse model. CTB, IL-12, MUC1, ODN
62  2010 ATR-X syndrome protein targets tandem repeats and influences allele-specific expression in a size-dependent manner. ---
63  2010 Induction of antigen-specific CTL and antibody responses in mice by a novel recombinant tandem repeat DNA vaccine targeting at mucin 1 of pancreatic cancer. CTL, ELISA, MUC1, rhTR
64  2010 Mass spectrometric analysis of Ehrlichia chaffeensis tandem repeat proteins reveals evidence of phosphorylation and absence of glycosylation. anti-P-Tyr, EDC, MALDI-TOF
65  2010 Molecular characterization of antibody epitopes of Ehrlichia chaffeensis ankyrin protein 200 and tandem repeat protein 47 and evaluation of synthetic immunodeterminants for serodiagnosis of human monocytotropic ehrlichiosis. ELISA, HME, IFA, TRPs
66  2010 Structure and function of glycosylated tandem repeats from Candida albicans Als adhesins. ---
67  2010 Upregulated expression of B-cell antigen family tandem repeat proteins by Leishmania amastigotes. ELISAs
68  2010 Variable Number Tandem Repeat (VNTR) analysis reveals genetic diversity within Mycoplasma mycoides mycoides small colony isolates from Nigeria. VNTR
69  2009 An Ehrlichia chaffeensis tandem repeat protein interacts with multiple host targets involved in cell signaling, transcriptional regulation, and vesicle trafficking. CAP1, DC, PCGF5, PTPN2
70  2009 Closing the gaps between genotype and phenotype in Rickettsia rickettsii. InDel, RMSF
71  2009 Expansion of tandem repeats in sea anemone Nematostella vectensis proteome: A source for gene novelty? ---
72  2009 Major species-specific antibody epitopes of the Ehrlichia chaffeensis p120 and E. canis p140 orthologs in surface-exposed tandem repeat regions. ---
73  2008 A variable-length PCR target protein of Ehrlichia chaffeensis contains major species-specific antibody epitopes in acidic serine-rich tandem repeats. VLPT
74  2008 Genetic regulation of MUC1 alternative splicing in human tissues. ---
75  2008 Immunological dominance of Trypanosoma cruzi tandem repeat proteins. ---
76  2008 Marked variation in predicted and observed variability of tandem repeat loci across the human genome. WGS
77  2007 Bioinformatic identification of tandem repeat antigens of the Leishmania donovani complex. ---
78  2007 Glycoprotein I of herpes simplex virus type 1 contains a unique polymorphic tandem-repeated mucin region. GalNAc, gI, HSV-1
79  2006 Cloning, characterization, and serodiagnostic evaluation of Leishmania infantum tandem repeat proteins. rLinJ16.1750, VL
80  2006 MUC7 haplotype analysis: results from a longitudinal birth cohort support protective effect of the MUC7*5 allele on respiratory function. ---
81  2006 Threonine-rich repeats increase fibronectin binding in the Candida albicans adhesin Als5p. Ig
82  2004 Generation and characterization of anti-MUC4 monoclonal antibodies reactive with normal and cancer cells in humans. ELISA, mAbs
83  2004 Protection against MUC1 expressing mouse tumours by intra-muscular injection of MUC1 cDNA requires functional CD8+ and CD4+ T cells but does not require the MUC1 tandem repeat domain. FL, IM
84  2004 Tumor-specific immunity in MUC1.Tg mice induced by immunization with peptide vaccines from the cytoplasmic tail of CD227 (MUC1). CT, MUC1
85  2003 Contribution of the MUC1 tandem repeat and cytoplasmic tail to invasive and metastatic properties of a pancreatic cancer cell line. CT
86  2003 Hypervariability of the membrane-associated mucin and cancer marker MUC1. MVR-PCR
87  2003 Identification of the motifs and amino acids in aggrecan G1 and G2 domains involved in product secretion. ---
88  2003 The contribution of tandem repeat number to the O-glycosylation of mucins. ---
89  2001 Characteristics of rodent intestinal mucin Muc3 and alterations in a mouse model of human cystic fibrosis. ---
90  2001 Comparing tandem repeats and multiple antigenic peptides as the antigens to detect antibodies by enzyme immunoassay. MAPs
91  2001 In vivo glycosylation of mucin tandem repeats. ---
92  1999 Heterodimers of the SnoN and Ski oncoproteins form preferentially over homodimers and are more potent transforming agents. LZ
93  1999 Passively transferred anti-MUC1 antibodies cause neither autoimmune disorders nor immunity against transplanted tumors in MUC1 transgenic mice. Ab, MUC1
94  1997 High affinity dimerization by Ski involves parallel pairing of a novel bipartite alpha-helical domain. LZ
95  1996 The largest isoform of platelet membrane glycoprotein Ib alpha is commonly distributed in eastern Asian populations. ---
96  1995 Presentation of HIV V3 loop epitopes for enhanced antigenicity, immunogenicity and diagnostic potential. ELISA, Ig, PND
97  1993 The cAMP response element in the rat thyrotropin receptor promoter. Regulation by each decanucleotide of a flanking tandem repeat uses different, additive, and novel mechanisms. bp, CRE
98  1990 Structure and expression of the human polymorphic epithelial mucin gene: an expressed VNTR unit. PEM