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Abbreviation : WGS
Long Form : whole genome shotgun sequencing
No. Year Title Co-occurring Abbreviation
2018 Evaluation of genome scaffolding tools using pooled clone sequencing. PCS
2018 Whole genome shotgun sequencing revealed highly polymorphic genome regions and genes in Escherichia coli O157:H7 isolates collected from a single feedlot. SNV, VFDB
2018 Whole-genome epidemiology, characterisation, and phylogenetic reconstruction of Staphylococcus aureus strains in a paediatric hospital. MLST, MRSA, MSSA, PVL, SCCmec, SPA
2017 The unique genomic landscape surrounding the EPSPS gene in glyphosate resistant Amaranthus palmeri: a repetitive path to resistance. BAC, EPSPS
2016 Analysis of the microbiome: Advantages of whole genome shotgun versus 16S amplicon sequencing. rRNA
2015 Functional analysis and transcriptional output of the Gottingen minipig genome. lncRNAs
2014 Efficient de novo assembly of large and complex genomes by massively parallel sequencing of Fosmid pools. FP
2014 Genomic V exons from whole genome shotgun data in reptiles. Ig, TR
2014 Use of whole genome shotgun metagenomics: a practical guide for the microbiome-minded physician scientist. ---
10  2013 A tandem array of CBF/DREB1 genes is located in a major freezing tolerance QTL region on Medicago truncatula chromosome 6. BAC, CBF, DREB1
11  2013 Evolution of enterohemorrhagic escherichia coli O26 based on single-nucleotide polymorphisms. EHEC, HUS, SNP, SNP-CC
12  2012 Exploring single-sample SNP and INDEL calling with whole-genome de novo assembly. InDel
13  2011 Genomic signatures of strain selection and enhancement in Bacillus atrophaeus var. globigii, a historical biowarfare simulant. BG, BW
14  2010 An integrated physical, genetic and cytogenetic map of Brachypodium distachyon, a model system for grass research. BAC, BES, FISH
15  2010 Pig genome sequence--analysis and publication strategy. SGSC
16  2008 Re-annotation of the physical map of Glycine max for polyploid-like regions by BAC end sequence driven whole genome shotgun read assembly. BES, HSVs, MTP
17  2006 A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes. ---
18  2006 Physical map-assisted whole-genome shotgun sequence assemblies. BAC
19  2001 Comparing vertebrate whole-genome shotgun reads to the human genome. ---