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Abbreviation : rRT-PCR
Long Form : real-time reverse transcription-PCR
No. Year Title Co-occurring Abbreviation
2020 Comparison of a laboratory-developed test targeting the envelope gene with three nucleic acid amplification tests for detection of SARS-CoV-2. CDC, CI, COVID-19, EUA, ORF1ab, SHC
2020 Dengue Virus and Yellow Fever Virus Detection Using Reverse Transcription-Insulated Isothermal PCR and Comparison with Real-Time RT-PCR. DENV, YFV
2020 Development of an RNA Strand-Specific Hybridization Assay To Differentiate Replicating versus Nonreplicating Influenza A Viruses. IAV, SSH, vRNA
2020 Epidemiological Correlates of PCR Cycle Threshold Values in the Detection of SARS-CoV-2. Ct
2020 Evaluation of Four Commercial Kits for SARS-CoV-2 Real-Time Reverse-Transcription Polymerase Chain Reaction Approved by Emergency-Use-Authorization in Korea. EUA, NPS
2020 Further development of a reverse-transcription loop-mediated isothermal amplification (RT-LAMP) assay for the detection of foot-and-mouth disease virus and validation in the field with use of an internal positive control. FMD, IPC, RT-LAMP, RT-LAMP-FMDV
2020 Implementation of Antibody Rapid Diagnostic Testing versus Real-Time Reverse Transcription-PCR Sample Pooling in the Screening of COVID-19: a Case of Different Testing Strategies in Africa. COVID-19, SARS-CoV-2
2020 Investigation and Serologic Follow-Up of Contacts of an Early Confirmed Case-Patient with COVID-19, Washington, USA. SARS-CoV-2
2020 Quality of Ribonucleic Acid Extraction for Real-Time Reverse Transcription-PCR (rRT-PCR) of SARS-CoV-2: Importance of Internal Control Monitoring. ---
10  2020 RNA Extraction from Swine Samples and Detection of Influenza A Virus in Swine by Real-Time RT-PCR. IAV
11  2020 Temporal Change of SARS-CoV-2 in Clinical Specimens of COVID-19 Pneumonia Patients. ---
12  2019 Epidemiological Evidence for Lineage-Specific Differences in the Risk of Inapparent Chikungunya Virus Infection. CHIKV, CI, ECSA, IgM-ELISAs
13  2019 Evaluation of a Field-Deployable Insulated Isothermal Polymerase Chain Reaction Nucleic Acid Analyzer for Influenza A Virus Detection at Swine Exhibitions. IAV
14  2019 Mortality-Based Triggers and Premovement Testing Protocols for Detection of Highly Pathogenic Avian Influenza Virus Infection in Commercial Upland Game Birds. HPAI
15  2019 One-step pentaplex real-time polymerase chain reaction assay for detection of zika, dengue, chikungunya, West nile viruses and a human housekeeping gene. LOD, Rn, WNV, ZIKV
16  2018 A multiplex real-time RT-PCR for simultaneous detection of four most common avian respiratory viruses. AIV, IBV, ILTV, LOD, LOQ, NDV, ROC
17  2018 Comparison of Six Sample-to-Answer Influenza A/B and Respiratory Syncytial Virus Nucleic Acid Amplification Assays Using Respiratory Specimens from Children. CDC, NP, RP, RSV, STA
18  2018 Diagnostic Assay Development for Poliovirus Eradication. ITD, WPV, WPV1
19  2018 Laboratory testing and phylogenetic analysis during a mumps outbreak in Ontario, Canada. ---
20  2018 Seasonal influenza vaccine effectiveness against laboratory-confirmed influenza hospitalizations - Latin America, 2013. CI, SARI, VE
21  2018 Surveillance for Heartland and Bourbon Viruses in Eastern Kansas, June 2016. BRBV, Say
22  2018 Utility of a Stressed Single Nucleotide Polymorphism (SNP) Real-Time PCR Assay for Rapid Identification of Measles Vaccine Strains in Patient Samples. SNP
23  2017 Bluetongue virus infection in naive cattle: Identification of circulating serotypes and associated Culicoides biting midge species in Trinidad. BTV
24  2017 Defining the relative performance of isothermal assays that can be used for rapid and sensitive detection of foot-and-mouth disease virus. FMDV, OP, RT-LAMP, RT-RPA
25  2017 Development of a multiplex probe combination-based one-step real-time reverse transcription-PCR for NA subtype typing of avian influenza virus. NA
26  2017 Evaluation of Altona Diagnostics RealStar Zika Virus Reverse Transcription-PCR Test Kit for Zika Virus PCR Testing. ZIKV
27  2017 Evaluation of Aptima Zika Virus Assay. CI, GCE, TMA, ZIKV
28  2017 Identification of Type A Influenza Viruses from Wild Birds on the Delmarva Peninsula, 2007-10. AI, AIV, Ct, USDA
29  2017 Progress towards Rapid Detection of Measles Vaccine Strains: a Tool To Inform Public Health Interventions. ---
30  2016 Comparative Evaluation of Three Homogenization Methods for Isolating Middle East Respiratory Syndrome Coronavirus Nucleic Acids From Sputum Samples for Real-Time Reverse Transcription PCR. Ct, MERS-CoV, NALC, PBS, PK-DNase
31  2016 Evaluation of a smartphone-based rapid fluorescent diagnostic system for H9N2 virus in specific-pathogen-free chickens. CL, dpi, OP, SRFDS
32  2016 Middle East Respiratory Syndrome Coronavirus Transmission in Extended Family, Saudi Arabia, 2014. MERS-CoV
33  2016 Porcine epidemic diarrhea virus: An overview of current virological and serological diagnostic methods. IF, IHC, PCR, PEDV
34  2016 Prolonged intermittent virus shedding during an outbreak of canine influenza A H3N2 virus infection in dogs in three Chicago area shelters: 16 cases (March to May 2015). ---
35  2016 Quantifying the effect of lactogenic antibody on porcine epidemic diarrhea virus infection in neonatal piglets. dpi, PEDV
36  2016 Robust Real-Time Reverse Transcription-PCR for Detection of Foot-and-Mouth Disease Virus Neutralizing Carryover Contamination. FMD
37  2016 Survey of Clinical Laboratory Practices for 2015 Middle East Respiratory Syndrome Coronavirus Outbreak in the Republic of Korea. MERS-CoV, TAT
38  2016 Swine Influenza Virus and Association with the Porcine Respiratory Disease Complex in Pig Farms in Southern Brazil. HA, PRDC, swIAV
39  2016 [Influenza surveillance in five consecutive seasons during post pandemic period: results from National Influenza Center, Turkey]. ---
40  2015 Evaluation of a Real-Time Reverse Transcription-PCR Assay for Detection of Enterovirus D68 in Clinical Samples from an Outbreak in New York State in 2014. 5'-UTR, EV-D68, NP, RP
41  2015 Evaluation of Signature Erosion in Ebola Virus Due to Genomic Drift and Its Impact on the Performance of Diagnostic Assays. EBOV, RESTV, SUDV
42  2015 Temporal Variation in Viral Hemorrhagic Septicemia Virus Antibodies in Freshwater Drum (Aplodinotus grunniens) Indicates Cyclic Transmission in Lake Winnebago, Wisconsin. VHSV, VN
43  2014 Influenza and Respiratory Syncytial viral infections in Malaysia: Demographic and Clinical perspective. IFA
44  2014 One-step real-time reverse transcription-PCR for the detection of turkey reoviruses. ---
45  2014 Real-time reverse transcription-PCR assay panel for Middle East respiratory syndrome coronavirus. CoV, MERS, upE
46  2014 Real-time RT-PCR assays for discriminating influenza B virus Yamagata and Victoria lineages. HI
47  2013 Comparison of the FDA-approved CDC DENV-1-4 real-time reverse transcription-PCR with a laboratory-developed assay for dengue virus detection and serotyping. DENV
48  2013 Comparison of the sensitivity of laboratory diagnostic methods from a well-characterized outbreak of mumps in New York city in 2009. CDC, EIA, MMR
49  2013 Development of an internally controlled real-time reverse transcriptase PCR assay for pan-dengue virus detection and comparison of four molecular dengue virus detection assays. DENV, NAATs
50  2013 Single-reaction, multiplex, real-time rt-PCR for the detection, quantitation, and serotyping of dengue viruses. DENV
51  2013 [Development of a real-time reverse transcriptase PCR assay for detection of E119V amino acid change in neuraminidase of influenza A (H3N2) using the TaqMan-MGB probe]. CV, NA
52  2012 Analysis of clinical samples for early detection of classical swine fever during infection with low, moderate, and highly virulent strains in relation to the onset of clinical signs. CSF, dpi
53  2012 Avian influenza virus investigation in wild bobwhite quail from Texas. AIV, Ct
54  2012 Comparison of nasopharyngeal flocked swabs and nasopharyngeal wash collection methods for respiratory virus detection in hospitalized children using real-time polymerase chain reaction. ---
55  2012 Rapid detection of foot-and-mouth disease virus using a field-portable nucleic acid extraction and real-time PCR amplification platform. FMDV
56  2012 SYBR green-based real-time reverse transcription-PCR for typing and subtyping of all hemagglutinin and neuraminidase genes of avian influenza viruses and comparison to standard serological subtyping tests. AIV, HA, HP, NA, NP
57  2011 Design and performance of the CDC real-time reverse transcriptase PCR swine flu panel for detection of 2009 A (H1N1) pandemic influenza virus. CDC, N. Am, pdm, SIV
58  2011 Development and evaluation of a rapid influenza diagnostic test for the pandemic (H1N1) 2009 influenza virus. ---
59  2011 Evaluation of twelve real-time reverse transcriptase PCR primer-probe sets for detection of pandemic influenza A/H1N1 2009 virus. HA, NA
60  2011 Evaluation of two magnetic-bead-based viral nucleic acid purification kits and three real-time reverse transcription-PCR reagent systems in two TaqMan assays for equine arteritis virus detection in semen. ---
61  2011 Evaluation study of a portable impedance biosensor for detection of avian influenza virus. AIV
62  2011 Experimental inoculation of chickens with gull-derived low pathogenic avian influenza virus subtype H16N3 causes limited infection. AIV, dpi
63  2011 Influenza vaccine effectiveness in Wisconsin during the 2007-08 season: comparison of interim and final results. VE
64  2011 One-step real-time reverse transcription-PCR assays for detecting and subtyping pandemic influenza A/H1N1 2009, seasonal influenza A/H1N1, and seasonal influenza A/H3N2 viruses. H1N1
65  2011 Rapid detection of the H275Y oseltamivir resistance mutation in influenza A/H1N1 2009 by single base pair RT-PCR and high-resolution melting. HRM
66  2010 Avian influenza in backyard poultry of the Mopti region, Mali. AIV, IVA
67  2010 Detection of oseltamivir resistance during treatment of 2009 H1N1 influenza virus infection in immunocompromised patients: utility of cycle threshold values of qualitative real-time reverse transcriptase PCR. ---
68  2010 Development of an L gene real-time reverse-transcription PCR assay for the detection of avian paramyxovirus type 1 RNA in clinical samples. APMV-1, NDV
69  2010 Specific detection of Rinderpest virus by real-time reverse transcription-PCR in preclinical and clinical samples from experimentally infected cattle. RPV
70  2010 The detection of oseltamivir-resistant pandemic influenza A/H1N1 2009 viruses using a real-time RT-PCR assay. ---
71  2010 Validation of a real-time reverse transcriptase-PCR assay for the detection of H7 avian influenza virus. AIV, SEPRL
72  2010 Virological and pathological findings in Bluetongue virus serotype 8 infected sheep. BT, BTV-8, d.p.i, RNA
73  2009 Assessment of human enteric viruses in cultured and wild bivalve molluscs. AiV, AsV, EV, HAV, NoV, RT
74  2009 design of multiplexed detection assays for identification of avian influenza a virus subtypes pathogenic to humans by SmartCycler real-time reverse transcription-PCR. AIV, HA, IAV
75  2009 Development and evaluation of one-step TaqMan real-time reverse transcription-PCR assays targeting nucleoprotein, matrix, and hemagglutinin genes of equine influenza virus. EIV, HA, NP
76  2008 A rapid and sensitive real-time reverse transcription PCR for the pathotyping of South African H5N2 avian influenza viruses. FRET, HPAI, LPAI
77  2007 Development of a novel recombinant encapsidated RNA particle: evaluation as an internal control for diagnostic RT-PCR. CPMV, FMDV, SVDV
78  2007 Evaluation of removal of noroviruses during wastewater treatment, using real-time reverse transcription-PCR: different behaviors of genogroups I and II. GI