A Search Service for Abbreviation / Long Form

■ Search Result - Abbreviation : RNA-Seq

Search Conditions:
Search Keyword : RNA-Seq
Search Method : Exact match.
Research Area:

Results:  
Hit abbr.: 2 kinds.
(Click one to see its hit entries.)

(Appearance freq, Descending)
Abbreviation: RNA-Seq
Appearance Frequency: 902 time(s)
Long forms: 46

Display Settings:
[Entries Per Page]
 per page
Page Control
Page: of
Long Form No. Long Form Research Area Co-occurring Abbreviation PubMed/MEDLINE Info. (Year, Title)
RNA sequencing
(815 times)
Molecular Biology
(109 times)
DEGs (84 times)
GO (52 times)
qRT-PCR (32 times)
2009 Statistical inferences for isoform expression in RNA-Seq.
RNA sequencing technology
(16 times)
Medicine
(5 times)
DEGs (4 times)
KEGG (2 times)
miRNAs (2 times)
2012 Hybridization-based reconstruction of small non-coding RNA transcripts from deep sequencing data.
RNA sequence
(7 times)
Medicine
(3 times)
AFM (1 time)
BR (1 time)
drDCM (1 time)
2014 Successful pod infections by Moniliophthora roreri result in differential Theobroma cacao gene expression depending on the clone's level of tolerance.
resistance, transcriptome sequencing
(6 times)
Molecular Biology
(2 times)
CYp (1 time)
DEGs (1 time)
FDp (1 time)
2012 Detecting transcription of ribosomal protein pseudogenes in diverse human tissues from RNA-seq data.
Ribonucleic acid sequencing
(6 times)
Veterinary Medicine
(2 times)
BP (1 time)
CR (1 time)
DEGs (1 time)
2015 The developmental transcriptome landscape of bovine skeletal muscle defined by Ribo-Zero ribonucleic acid sequencing.
RNA transcriptome sequencing
(5 times)
Communicable Diseases
(1 time)
CGH (1 time)
iPSCs (1 time)
lncRNAs (1 time)
2012 Application of the Gini correlation coefficient to infer regulatory relationships in transcriptome analysis.
RNA sequencing data
(3 times)
Medical Informatics
(1 time)
CGA (1 time)
DA (1 time)
GT43 (1 time)
2015 Glycosyltransferase family 43 is also found in early eukaryotes and has three subfamilies in Charophycean green algae.
RNA-sequencing analysis
(3 times)
Biotechnology
(1 time)
CBM (1 time)
IAV (1 time)
ISGs (1 time)
2015 [Inhibition of replication and transcription of WSN influenza A virus by IFIT family genes].
Recent advances in RNA sequencing
(2 times)
Medicine
(1 time)
AS (1 time)
DAS (1 time)
DE (1 time)
2013 Evaluating the impact of sequencing depth on transcriptome profiling in human adipose.
10  RNA shotgun sequencing
(2 times)
Virology
(1 time)
HCV (1 time)
2019 Low-Bias RNA Sequencing of the HIV-2 Genome from Blood Plasma.
11  RNA-based next-generation sequencing
(2 times)
Biochemistry
(1 time)
NHPRTR (1 time)
NHPs (1 time)
2013 The non-human primate reference transcriptome resource (NHPRTR) for comparative functional genomics.
12  metabolism-related nsSNVs, next-generation transcriptome sequencing
(1 time)
Medicine
(1 time)
nsSNVs (1 time)
PTCR (1 time)
2012 RNA-Seq approach for genetic improvement of meat quality in pig and evolutionary insight into the substrate specificity of animal carbonyl reductases.
13  random hexamers and the cDNA is subsequently sequenced
(1 time)
Molecular Biology
(1 time)
smsDGE (1 time)
2011 RNA sequencing and quantitation using the Helicos Genetic Analysis System.
14  RcsB-regulated genes involved in swarmer cell differentiation, transcriptome sequencing
(1 time)
Bacteriology
(1 time)
5'-RACE (1 time)
qRT (1 time)
2015 Regulation of the Min Cell Division Inhibition Complex by the Rcs Phosphorelay in Proteus mirabilis.
15  reads present in transcriptome sequencing
(1 time)
Virology
(1 time)
HPV18 (1 time)
WXS (1 time)
2015 HeLa nucleic acid contamination in the cancer genome atlas leads to the misidentification of human papillomavirus 18.
16  reads using whole transcript sequencing
(1 time)
Zoology
(1 time)
S. Typhimurium (1 time)
2011 Deep sequencing of the innate immune transcriptomic response of zebrafish embryos to Salmonella infection.
17  Recent advances in next-generation sequencing technology allow high-throughput cDNA sequencing
(1 time)
Medicine
(1 time)
DEGs (1 time)
2014 A comparative study of techniques for differential expression analysis on RNA-Seq data.
18  recent massive parallel sequencing
(1 time)
Genetic Phenomena
(1 time)
HSD11B1 (1 time)
2017 Analysis of Purified Pancreatic Islet Beta and Alpha Cell Transcriptomes Reveals 11beta-Hydroxysteroid Dehydrogenase (Hsd11b1) as a Novel Disallowed Gene.
19  recent years, the massively-parallel cDNA sequencing
(1 time)
Medical Informatics
(1 time)
--- 2017 DART - a fast and accurate RNA-seq mapper with a partitioning strategy.
20  recently developed to perform transcriptome sequencing
(1 time)
Science
(1 time)
--- 2014 Microfluidic single-cell whole-transcriptome sequencing.
21  Recently, next-generation sequencing techniques at the transcriptome level
(1 time)
Medicine
(1 time)
CML (1 time)
PE (1 time)
SE (1 time)
2012 FusionFinder: a software tool to identify expressed gene fusion candidates from RNA-Seq data.
22  reduced proliferative capacity, which we assessed by transcriptome sequencing
(1 time)
Cell Biology
(1 time)
--- 2015 PATZ1 Is a DNA Damage-Responsive Transcription Factor That Inhibits p53 Function.
23  regulation, and whole-transcriptome sequencing
(1 time)
Biology
(1 time)
lncRNAs (1 time)
2017 Long noncoding RNA repertoire in chicken liver and adipose tissue.
24  regulators by demonstrating differential allelic expression with sequencing of transcriptomes
(1 time)
Biology
(1 time)
--- 2010 Polymorphic cis- and trans-regulation of human gene expression.
25  relapse was sequenced using a whole-transcriptome shotgun sequencing
(1 time)
Hematologic Neoplasms
(1 time)
ALL (1 time)
AS (1 time)
2012 Application of the whole-transcriptome shotgun sequencing approach to the study of Philadelphia-positive acute lymphoblastic leukemia.
26  relative abundance data obtained by Nanostring or transcriptome sequencing
(1 time)
Allergy and Immunology
(1 time)
CF (1 time)
2016 Use of a Multiplex Transcript Method for Analysis of Pseudomonas aeruginosa Gene Expression Profiles in the Cystic Fibrosis Lung.
27  relative accuracy of microarrays and transcriptome sequencing
(1 time)
Genetics
(1 time)
--- 2009 Estimating accuracy of RNA-Seq and microarrays with proteomics.
28  remission of EAE disease, we used Illumina deep mRNA sequencing
(1 time)
Neuropharmacology
(1 time)
APCs (1 time)
CNS (1 time)
EAE (1 time)
2016 Increase of Alternatively Activated Antigen Presenting Cells in Active Experimental Autoimmune Encephalomyelitis.
29  report the high-coverage sequencing
(1 time)
Parasitology
(1 time)
--- 2015 Functional analysis of Girardia tigrina transcriptome seeds pipeline for anthelmintic target discovery.
30  represented in the sequence sample
(1 time)
Laboratory Techniques and Procedures
(1 time)
--- 2008 Mapping and quantifying mammalian transcriptomes by RNA-Seq.
31  resequencing, transcriptional profiling
(1 time)
Geriatrics
(1 time)
NGS (1 time)
2010 Next-generation sequencing in aging research: emerging applications, problems, pitfalls and possible solutions.
32  resistance as revealed by transcriptome sequencing
(1 time)
Microbiology
(1 time)
RNAP (1 time)
2014 Linking system-wide impacts of RNA polymerase mutations to the fitness cost of rifampin resistance in Pseudomonas aeruginosa.
33  resolution than microarrays, next-generation sequencing of mRNA
(1 time)
Medical Informatics
(1 time)
--- 2013 Calculating sample size estimates for RNA sequencing data.
34  resolution using mRNA sequencing
(1 time)
Molecular Biology
(1 time)
ChIP-Seq (1 time)
NGS (1 time)
2017 Systems Biology Analyses in Chicken: Workflow for Transcriptome and ChIP-Seq Analyses Using the Chicken Skin Paradigm.
35  response to chronic cigarette smoking using massive parallel mRNA sequencing
(1 time)
Genetics
(1 time)
SAE (1 time)
2012 RNA-Seq quantification of the human small airway epithelium transcriptome.
36  resulting transcriptome was analyzed by deep sequencing
(1 time)
Chemistry
(1 time)
EJC (1 time)
2016 The Exon Junction Complex Controls the Efficient and Faithful Splicing of a Subset of Transcripts Involved in Mitotic Cell-Cycle Progression.
37  rice and Burkholderia glumae, we used transcriptomics via next-generation sequencing
(1 time)
Genetics
(1 time)
--- 2014 Transcriptomic dissection of the rice-Burkholderia glumae interaction.
38  river water as control, and high-throughput mRNA sequencing
(1 time)
Genetics
(1 time)
ADW (1 time)
2016 De novo assembly and analysis of changes in the protein-coding transcriptome of the freshwater shrimp Paratya australiensis (Decapoda: Atyidae) in response to acid sulfate drainage water.
39  RNA depletion library preparations, followed byRNA sequencing
(1 time)
Neoplasms
(1 time)
DE (1 time)
GS (1 time)
lncRNAs (1 time)
2018 Long Noncoding RNAs AC009014.3 and Newly Discovered XPLAID Differentiate Aggressive and Indolent Prostate Cancers.
40  RNA of laser-dissected ASM was sequenced
(1 time)
Critical Care
(1 time)
ASM (1 time)
2013 Glucocorticoid-induced changes in gene expression of airway smooth muscle in patients with asthma.
41  RNA was sequenced
(1 time)
Genetic Phenomena
(1 time)
--- 2017 Triportheus albus Cope, 1872 in the Blackwater, Clearwater, and Whitewater of the Amazon: A Case of Phenotypic Plasticity?
42  RNA was used for high-throughput, sequencing-based transcriptomic analysis
(1 time)
Pulmonary Medicine
(1 time)
AhR (1 time)
BPD (1 time)
2014 The genome-wide transcriptional response to neonatal hyperoxia identifies Ahr as a key regulator.
43  RNA, and RNA-sequencing
(1 time)
Medicine
(1 time)
LAM (1 time)
2012 A powerful method for transcriptional profiling of specific cell types in eukaryotes: laser-assisted microdissection and RNA sequencing.
44  RNA-based sequencing
(1 time)
Biochemistry
(1 time)
--- 2012 FANSe: an accurate algorithm for quantitative mapping of large scale sequencing reads.
45  RpoE-dependent genes using transcriptome sequencing
(1 time)
Bacteriology
(1 time)
ECF (1 time)
TCSs (1 time)
2014 Haemophilus ducreyi RpoE and CpxRA appear to play distinct yet complementary roles in regulation of envelope-related functions.
46  short-read massively-parallel sequencing
(1 time)
Neoplasms
(1 time)
HPV (1 time)
OT (1 time)
2013 Oral cavity tumors in younger patients show a poor prognosis and do not contain viral RNA.