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Abbreviation: bind
Appearance Frequency: 26 time(s)
Long forms: 24

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Long Form No. Long Form Research Area Co-occurring Abbreviation PubMed/MEDLINE Info. (Year, Title)
binding free energy, deltaG
(2 times)
Biochemistry
(1 time)
ABP (1 time)
Av (1 time)
DHFR (1 time)
1998 A new method for predicting binding free energy between receptor and ligand.
binding, DeltaG
(2 times)
Chemistry
(2 times)
HABA (1 time)
MM-PBSA (1 time)
nAChRs (1 time)
2000 Binding of a diverse set of ligands to avidin and streptavidin: an accurate quantitative prediction of their relative affinities by a combination of molecular mechanics and continuum solvent models.
based on the relationship deltaG
(1 time)
Pharmacology
(1 time)
part (1 time)
2003 Baseline lipophilicity relationships in human cytochromes P450 associated with drug metabolism.
behavior, which permitted the determination of both K
(1 time)
Chemistry
(1 time)
CYP119 (1 time)
2008 Spectra and kinetic studies of the compound I derivative of cytochrome P450 119.
below result in all cases investigated thus far: deltaG
(1 time)
Pharmacology
(1 time)
part (1 time)
2003 Baseline lipophilicity relationships in human cytochromes P450 associated with drug metabolism.
better than the RESP model, with the DeltaG
(1 time)
Biochemistry
(1 time)
QPLD (1 time)
2008 Binding free energy calculation for duocarmycin/DNA complex based on the QPLD-derived partial charge model.
between the estimated deltaG
(1 time)
Biomedical Engineering
(1 time)
--- 2005 The 3D structure of the binding pocket of the human oxytocin receptor for benzoxazine antagonists, determined by molecular docking, scoring functions and 3D-QSAR methods.
between the experimentally determined versus the predicted DeltaG
(1 time)
Drug Design
(1 time)
LIE (1 time)
QSAR (1 time)
2015 Comparison of Performance of Docking, LIE, Metadynamics and QSAR in Predicting Binding Affinity of Benzenesulfonamides.
big negative values for DeltaG
(1 time)
Chemistry
(1 time)
--- 2011 Study of Tamiflu sensitivity to variants of A/H5N1 virus using different force fields.
10  binding affinity and systematically underestimated the differences between the DeltaG
(1 time)
Chemistry
(1 time)
BChE (1 time)
ES (1 time)
PMF (1 time)
2011 Human butyrylcholinesterase-cocaine binding pathway and free energy profiles by molecular dynamics and potential of mean force simulations.
11  binding affinity DeltaG
(1 time)
Biochemistry
(1 time)
AChE (1 time)
BChE (1 time)
2015 Synthesis of novel triazoles and a tetrazole of escitalopram as cholinesterase inhibitors.
12  binding constants, K
(1 time)
Biochemistry
(1 time)
CMC (1 time)
OGDE (1 time)
SDS (1 time)
2011 Interactions between dyes and surfactants in inkjet ink used for textiles.
13  binding decreased from DeltaG
(1 time)
Chemistry
(1 time)
--- 2011 Aromatic and aliphatic CH hydrogen bonds fight for chloride while competing alongside ion pairing within triazolophanes.
14  binding energy, DeltaG
(1 time)
Biochemistry
(1 time)
CVB3 (1 time)
PCA (1 time)
2015 Effect of T68A/N126Y mutations on the conformational and ligand binding landscape of Coxsackievirus B3 3C protease.
15  binding enthalpies delta H
(1 time)
Pharmacology
(1 time)
GPC (1 time)
ITC (1 time)
SAXS (1 time)
2012 Biophysical properties of chitosan/siRNA polyplexes: profiling the polymer/siRNA interactions and bioactivity.
16  binding enthalpy estimates, DeltaH
(1 time)
Biophysics
(1 time)
QDMC (1 time)
RBDMC (1 time)
2013 Quantum effects and anharmonicity in the H2-Li(+)-benzene complex: a model for hydrogen storage materials.
17  binding free energy of a ligand to receptor DeltaG
(1 time)
Chemistry
(1 time)
--- 2011 Study of Tamiflu sensitivity to variants of A/H5N1 virus using different force fields.
18  binding process, while the negative DeltaH
(1 time)
Biochemistry
(1 time)
CMC (1 time)
OGDE (1 time)
SDS (1 time)
2011 Interactions between dyes and surfactants in inkjet ink used for textiles.
19  binding, i.e., the enthalpy change, DeltaH
(1 time)
Biochemistry
(1 time)
CMC (1 time)
OGDE (1 time)
SDS (1 time)
2011 Interactions between dyes and surfactants in inkjet ink used for textiles.
20  both the docking scores and MM-GBSA predicted Delta G
(1 time)
Biochemistry
(1 time)
DHFR (1 time)
MA (1 time)
PC (1 time)
2010 Design, synthesis, biological evaluation and computational investigation of novel inhibitors of dihydrofolate reductase of opportunistic pathogens.
21  Both the experimentally determined DeltaH
(1 time)
Polymers
(1 time)
ITC (1 time)
SAXS (1 time)
2010 Molecular characterization of the interaction between siRNA and PAMAM G7 dendrimers by SAXS, ITC, and molecular dynamics simulations.
22  heparin-binding domain to orient the molecule
(1 time)
Biomedical Engineering
(1 time)
SPR (1 time)
VEGFR2 (1 time)
2009 The phosphorylation of vascular endothelial growth factor receptor-2 (VEGFR-2) by engineered surfaces with electrostatically or covalently immobilized VEGF.
23  hinge-bending motion of the NMP
(1 time)
Molecular Biology
(1 time)
NMP (1 time)
2002 Conformational changes during the catalytic cycle of gluconate kinase as revealed by X-ray crystallography.
24  mechanic-Poisson-Boltzmann surface area method, we have shown that DeltaG
(1 time)
Chemistry
(1 time)
--- 2011 Study of Tamiflu sensitivity to variants of A/H5N1 virus using different force fields.