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■略語／展開語 : GTDB／Genome Taxonomy Database

関連PubMed/MEDLINE情報

合計出現文献数:

38

略語:

GTDB

(

>>共起略語

)

展開形:

Genome Taxonomy Database

GTDB (38)回

Genome Taxonomy Database (34)回

genome taxonomy database (3)回

Genome Tiaxonomc Database (1)回

GTDB / Genome Taxonomy Database (34)回

GTDB / genome taxonomy database (3)回

GTDB / Genome Tiaxonomc Database (1)回

No.
発表年
題目
共起略語

1

2025

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2

2024

A genome-based investigation of the Priestia species isolated from anthrax endemic regions in Kruger National Park.
ANI, ARG, CSIs, MLST, lef

3

2024

Database size positively correlates with the loss of species-level taxonomic resolution for the 16S rRNA and other prokaryotic marker genes.
---

4

2024

Description of Albidovulum litorale sp. nov., Albidovulum marisflavi sp. nov., Albidovulum salinarum sp. nov., and Albidovulum sediminicola sp. nov., and proposal for reclassification of the genus Defluviimonas as a later heterotypic synonym of Albidovulum.
ED, POCP

5

2024

GSR-DB: a manually curated and optimized taxonomical database for 16S rRNA amplicon analysis.
GSR-DB, RDP

6

2024

Integrating taxonomic signals from MAGs and contigs improves read annotation and taxonomic profiling of metagenomes.
BAT, CAT, MAGs, RAT

7

2024

Interactive Tree of Life (iTOL) v6: recent updates to the phylogenetic tree display and annotation tool.
iTOL

8

2024

LINgroups as a Robust Principled Approach to Compare and Integrate Multiple Bacterial Taxonomies.
LIN

9

2024

Metagenomic insights into Heimdallarchaeia clades from the deep-sea cold seep and hydrothermal vent.
MAGs

10

2024

MetagenomicKG: a knowledge graph for metagenomic applications.
BV-BRC, KEGG, KGs

11

2024

Putative genome contamination has minimal impact on the GTDB taxonomy.
ANI, GUNC

12

2024

RNA language models predict mutations that improve RNA function.
---

13

2024

RNA language models predict mutations that improve RNA function.
---

14

2024

The dynamic history of prokaryotic phyla: discovery, diversity and division.
---

15

2023

A long-awaited taxogenomic investigation of the family Halomonadaceae.
AAI, BMSAB, LPSN, OGRIs

16

2023

Complete Genome Sequence of Phormidium yuhuli AB48, Isolated from an Industrial Photobioreactor Environment.
---

17

2023

Exploring Acetogenesis in Firmicutes: From Phylogenetic Analysis to Solid Medium Cultivation with Solid-Phase Electrochemical Isolation Equipments.
MES, SPECIEs

18

2023

Genome-based classification of the class Halobacteria and description of Haladaptataceae fam. nov. and Halorubellaceae fam. nov.
LPSN, NCBI

19

2023

Lactiplantibacillus carotarum AMBF275T sp. nov. isolated from carrot juice fermentation.
ANI

20

2023

Metagenomics Databases for Bacteria.
RDP

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