A Search Service for Abbreviation / Long Form

■ Abbreviation / Long Form : SW / Smith-Waterman

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Total Number of Papers: 23
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Abbreviation:   SW  (>> Co-occurring Abbreviation)
Long Form:   Smith-Waterman
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No. Year Title Co-occurring Abbreviation
2018 LZW-Kernel: fast kernel utilizing variable length code blocks from LZW compressors for protein sequence classification. BLAST, LAK, LZW, SVMs
2018 Parallel Tiled Codes Implementing the Smith-Waterman Alignment Algorithm for Two and Three Sequences. ---
2018 pyPaSWAS: Python-based multi-core CPU and GPU sequence alignment. ---
2018 SWIFOLD: Smith-Waterman implementation on FPGA with OpenCL for long DNA sequences. FGPAs, GPUs
2017 FPGASW: Accelerating Large-Scale Smith-Waterman Sequence Alignment Application with Backtracking on FPGA Linear Systolic Array. ---
2015 A Multidimensional Time-Series Similarity Measure With Applications to Eldercare Monitoring. ---
2015 Accelerating Smith-Waterman Alignment for Protein Database Search Using Frequency Distance Filtration Scheme Based on CPU-GPU Collaborative System. FDFS, GPUs
2015 Flexible, fast and accurate sequence alignment profiling on GPGPU with PaSWAS. GPGPUs, PaSWAS
2014 An early illness recognition framework using a temporal Smith Waterman algorithm and NLP. EHR, NLP, TSW, UMLS
10  2014 GAMUT: GPU accelerated microRNA analysis to uncover target genes through CUDA-miRanda. CMTI, CUDA, GCUPS, GPU, HPC
11  2014 Identification of Insertion Deletion Mutations from Deep Targeted Resequencing. ---
12  2012 A novel partial sequence alignment tool for finding large deletions. ---
13  2012 GPU-accelerated protein sequence alignment. CPUs
14  2012 SAP--a sequence mapping and analyzing program for long sequence reads alignment and accurate variants discovery. SAP
15  2011 DOPA: GPU-based protein alignment using database and memory access optimizations. DOPA, GCUPS, GPUs
16  2009 A parallel pairwise local sequence alignment algorithm. BLAST
17  2009 An efficient and high performance linear recursive variable expansion implementation of the Smith-Waterman algorithm. RVE
18  2007 160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA). FPGA
19  2006 A novel Markov pairwise protein sequence alignment method for sequence comparison. MED, MPPSA
20  2006 [Information about the protein secondary structure improves quality of an alignment of protein sequences]. ---
21  2004 Fast and accurate database homology search using upper bounds of local alignment scores. ---
22  2000 Use of residue pairs in protein sequence-sequence and sequence-structure alignments. ---
23  1996 Sensitivity and selectivity in protein similarity searches: a comparison of Smith-Waterman in hardware to BLAST and FASTA. ---