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■ Abbreviation / Long Form : Ub / ubiquitin

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Abbreviation:   Ub  (>> Co-occurring Abbreviation)
Long Form:   ubiquitin
 Abbreviation Variation
 Long Form Variation
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No. Year Title Co-occurring Abbreviation
2021 A fine balance between Prpf19 and Exoc7 in achieving degradation of aggregated protein and suppression of cell death in spinocerebellar ataxia type 3. SCA3, UPS
2021 A Novel Strategy to Track Lysine-48 Ubiquitination by Fluorescence Resonance Energy Transfer. FRET
2021 Acetylated Ubiquitin Modulates the Catalytic Activity of the E1 Enzyme Uba1. acUb
2021 Beyond K48 and K63: non-canonical protein ubiquitination. ---
2021 BRCA1-BARD1 Regulates Axon Regeneration in Concert with the Gqα-DAG Signaling Network. BARD1, DAG, DAG, DGK, PA
2021 Crystal structures of an E1-E2-ubiquitin thioester mimetic reveal molecular mechanisms of transthioesterification. ---
2021 Design of genetically encoded sensors to detect nucleosome ubiquitination in live cells. PTMs
2021 Enhanced Live-Cell Delivery of Synthetic Proteins Assisted by Cell-Penetrating Peptides Fused to DABCYL. CPPs, SUMO-2, UbV
2021 Estimating the Directional Flexibility of Proteins from Equilibrium Thermal Fluctuations. ENM, GFP, MD, SMFS
10  2021 Histone Ubiquitination: An Integrative Signaling Platform in Genome Stability. DDR
11  2021 Impaired antioxidant defenses and DNA damage in the European glass eel (Anguilla anguilla) exposed to ocean warming and acidification. CAT, GPx, ROS, TAC
12  2021 In Vitro Analysis of E3 Ubiquitin Ligase Function. ---
13  2021 In vitro Glutamylation Inhibition of Ubiquitin Modification and Phosphoribosyl-Ubiquitin Ligation Mediated by Legionella pneumophila Effectors. ADPR-Ub, PR-Ub
14  2021 In-depth characterization of ubiquitin turnover in mammalian cells by fluorescence tracking. DUBs
15  2021 Insights into Ubiquitin Product Release in Hydrolysis Catalyzed by the Bacterial Deubiquitinase SdeA. NMR, Ub-VME, WT
16  2021 Mycobacterium tuberculosis protein kinase G acts as an unusual ubiquitinating enzyme to impair host immunity. Mtb, PknG, STPK, TAK1, TRAF2
17  2021 Polyubiquitin and ubiquitin-like signals share common recognition sites on proteasomal subunit Rpn1. NMR, Ubl
18  2021 Potent, Novel SARS-CoV-2 PLpro Inhibitors Block Viral Replication in Monkey and Human Cell Cultures. 3CLpro, DUB, PLpro
19  2021 Regulation of polyubiquitin genes to meet cellular ubiquitin requirement. ---
20  2021 Regulation of the endocytosis and prion-chaperoning machineries by yeast E3 ubiquitin ligase Rsp5 as revealed by orthogonal ubiquitin transfer. OUT
21  2021 RING domains act as both substrate and enzyme in a catalytic arrangement to drive self-anchored ubiquitination. ---
22  2021 Role of Virally-Encoded Deubiquitinating Enzymes in Regulation of the Virus Life Cycle. DUB
23  2021 The Dose-Dependent Pleiotropic Effects of the UBB+1 Ubiquitin Mutant. CNS, UPS
24  2021 The Role of E3s in Regulating Pluripotency of Embryonic Stem Cells and Induced Pluripotent Stem Cells. ESCs, iPSCs
25  2021 Tools for the discovery of biopolymer producing cysteine relays. ABPs, PHA
26  2021 TRIB2 modulates proteasome function to reduce ubiquitin stability and protect liver cancer cells against oxidative stress. E3s, PSMB5, TRIB2
27  2021 Ubiquitin proteasome system and autophagy associated proteins in human testicular tumors. UPS
28  2021 Ubiquitylome analysis reveals a central role for the ubiquitin-proteasome system in plant innate immunity. MAMP, RPN8b, UBC13
29  2020 17 O NMR Studies of Yeast Ubiquitin in Aqueous Solution and in the Solid State. ---
30  2020 A General in Vitro Assay for Studying Enzymatic Activities of the Ubiquitin System. FRET, FUSS
31  2020 A new Förster resonance energy transfer-based platform to track substrate ubiquitination by fluorescence. FRET
32  2020 A new gene inventory of the ubiquitin and ubiquitin-like conjugation pathways in Giardia intestinalis. BLAST, HMMs, Ub-L
33  2020 A novel polyubiquitin chain linkage formed by viral Ubiquitin is resistant to host deubiquitinating enzymes. AcMNPV, vUb
34  2020 Abolishing UCHL1's hydrolase activity exacerbates TBI-induced axonal injury and neuronal death in mice. APP, C90A, CCI, polyUb, TBI, UPP, WT
35  2020 An E1-Catalyzed Chemoenzymatic Strategy to Isopeptide-N-Ethylated Deubiquitylase-Resistant Ubiquitin Probes. DUB, LFQ
36  2020 Arabidopsis RAD23B regulates pollen development by mediating degradation of KRP1. KRP1, RAD23, UBA, UBL
37  2020 Arabidopsis UBC22, an E2 able to catalyze lysine-11 specific ubiquitin linkage formation, has multiple functions in plant growth and immunity. ---
38  2020 Arabidopsis Ubiquitin-Conjugating Enzymes UBC7, UBC13, and UBC14 Are Required in Plant Responses to Multiple Stress Conditions. ER, WT
39  2020 AtKPNB1, an Arabidopsis importin-β protein, is downstream of the RING E3 ubiquitin ligase AtAIRP1 in the ABA-mediated drought stress response. ABA
40  2020 Berberine diminishes cancer cell PD-L1 expression and facilitates antitumor immunity via inhibiting the deubiquitination activity of CSN5. BBR, CSN5, MDSCs, PD-1, PD-L1, TCM
41  2020 Biospeciation of Potential Vanadium Drugs of Acetylacetonate in the Presence of Proteins. EPR, LYZ, VVO2
42  2020 Bovine papillomavirus E5 oncoprotein upregulates parkin-dependent mitophagy in urothelial cells of cattle with spontaneous papillomavirus infection: A mechanistic study. BPV, ERas, Mfn2, PI3K
43  2020 Cardioprotective Potential of Exogenous Ubiquitin. IHD
44  2020 Caudatin Isolated from Cynanchum auriculatum Inhibits Breast Cancer Stem Cell Formation via a GR/YAP Signaling. BCSCs, CSCs, GR, YAP
45  2020 Characterization and Noncovalent Inhibition of the Deubiquitinase and deISGylase Activity of SARS-CoV-2 Papain-Like Protease. CoV, ISG15, PLpro, SARS-CoV-2
46  2020 Computational approach to target USP28 for regulating Myc. PPIs
47  2020 Decrypting UFMylation: How Proteins Are Modified with UFM1. UBLs, Ufm1
48  2020 Development of a DUB-selective fluorogenic substrate. ABPs, DUBs
49  2020 Development of Ubiquitin Variants with Selectivity for Ubiquitin C-Terminal Hydrolase Deubiquitinases. ABP, DUBs, UbV, UCHL1
50  2020 Disruption of the polyubiquitin gene Ubb reduces the self-renewal capacity of neural stem cells. HT, KO, NSCs, WT
51  2020 Diubiquitin-Based NMR Analysis: Interactions Between Lys6-Linked diUb and UBA Domain of UBXN1. diUbs, UBA, UBDs
52  2020 Drosophila NUAK functions with Starvin/BAG3 in autophagic protein turnover. Atg8a, BAG3, Fil, MHC, RNAi, Stv
53  2020 Ehrlichia chaffeensis TRP120-mediated ubiquitination and proteasomal degradation of tumor suppressor FBW7 increases oncoprotein stability and promotes infection. E. chaffeensis, FBW7, NICD
54  2020 Engineered unnatural ubiquitin for optimal detection of deubiquitinating enzymes. ABPs, DUBs, HyCoSuL
55  2020 ESI-MS Study of the Interaction of Potential Oxidovanadium(IV) Drugs and Amavadin with Model Proteins. ESI-MS, LYZ, Mb
56  2020 Evidence Linking Protein Misfolding to Quality Control in Progressive Neurodegenerative Diseases. CMA, MPs, NDs, PQC
57  2020 Exogenous ubiquitin attenuates hypoxia/reoxygenation-induced cardiac myocyte apoptosis via the involvement of CXCR4 and modulation of mitochondrial homeostasis. ARVMs, I/R
58  2020 Exploring the Promise of Targeting Ubiquitin-Proteasome System to Combat Alzheimer's Disease. AD
59  2020 Extracellular ubiquitin levels are increased in coronary heart disease and associated with the severity of the disease. ACS, AMI, AUC, CHD, CK-MB, CRP, cTnI, LDL-C, ROC, SAP, SDF-1a, UAP
60  2020 Extracellular ubiquitin protects cardiomyocytes during ischemia/hypoxia by inhibiting mitochondrial apoptosis pathway through CXCR4. AMI, CXCR4
61  2020 Facile Semisynthesis of Ubiquitylated Peptides with the Ligation Auxiliary 2-Aminooxyethanethiol. ---
62  2020 Flipping the substrate preference of Hazara virus ovarian tumour domain protease through structure-based mutagenesis. CCHFV, HAZV, ISG15, OTU
63  2020 Herpes simplex virus 1 infection induces ubiquitination of UBE1a. HSV-1
64  2020 Hsp40 proteins phase separate to chaperone the assembly and maintenance of membraneless organelles. FUS, SGs
65  2020 Hybrid Chains: A Collaboration of Ubiquitin and Ubiquitin-Like Modifiers Introducing Cross-Functionality to the Ubiquitin Code. Ub-L
66  2020 Insights into catalysis and regulation of non-canonical ubiquitination and deubiquitination by bacterial deamidase effectors. ---
67  2020 K27-Linked Diubiquitin Inhibits UCHL3 via an Unusual Kinetic Trap. ---
68  2020 Lysosomal integral membrane protein LGP85 (LIMP-2) is ubiquitinated at the N-terminal cytoplasmic domain. ELCs
69  2020 Machine Learning Driven Analysis of Large Scale Simulations Reveals Conformational Characteristics of Ubiquitin Chains. ---
70  2020 Mapping protein-polymer conformations in bioconjugates with atomic precision. CD, HSQC, NMR, PRE
71  2020 Molecular Basis of Ubiquitination Catalyzed by the Bacterial Transglutaminase MavC. ---
72  2020 Molecular dissection of two homoeologous wheat genes encoding RING H2-type E3 ligases: TaSIRFP-3A and TaSIRFP-3B. RING, ROS
73  2020 Molecular Insight into the Crosstalk of UPS Components and Alzheimer's Disease. AD
74  2020 Monitoring protein ubiquitination and SUMOylation in real-time by NMR. ---
75  2020 NEDD8 and ubiquitin ligation by cullin-RING E3 ligases. UBL
76  2020 New VIV, VIVO, VVO, and VVO2 Systems: Exploring their Interconversion in Solution, Protein Interactions, and Cytotoxicity. LYZ, SCXRD
77  2020 NMR Characterization of Conformational Interconversions of Lys48-Linked Ubiquitin Chains. ---
78  2020 Post-translational modifications inducing proteasomal degradation to counter HIV-1 infection. ISG, PTMs, Ubl
79  2020 Proteasome-Bound UCH37/UCHL5 Debranches Ubiquitin Chains to Promote Degradation. ---
80  2020 Protein Engineering in the Ubiquitin System: Tools for Discovery and Beyond. DUBs, UBDs
81  2020 Recruitment of Ubiquitin within an E2 Chain Elongation Complex. UBA
82  2020 Reduced free ubiquitin levels and proteasome activity in cultured neurons and brain tissues treated with amyloid beta aggregates. ---
83  2020 Regulation of genes for ubiquitination and SUMO-specific protease involved in larval development of the silkworm, Bombyx mori. fib-H, PSG, SUMO
84  2020 Residual Dipolar-Coupling-Based Conformational Comparison of Noncovalent Ubiquitin Homodimer with Covalently Linked Diubiquitin. RDCs
85  2020 Revealing USP7 Deubiquitinase Substrate Specificity by Unbiased Synthesis of Ubiquitin Tagged SUMO2. EGC
86  2020 Ring Finger Protein 11 acts on ligand-activated EGFR via the direct interaction with the UIM region of ANKRD13 protein family. ANKRD13, EGFR, RNF11, SILAC, UIM
87  2020 RNA Binding Suppresses Tsg101 Recognition of Ub-Modified Gag and Facilitates Recruitment to the Plasma Membrane. NC
88  2020 Sensitive ELISA-based detection method for the mitophagy marker p-S65-Ub in human cells, autopsy brain, and blood samples. AD, PD
89  2020 Sequencing Analysis and Identification of the Primary Peptide Component of the Dialyzable Leukocyte Extract "Transferon Oral": The Starting Point to Understand Its Mechanism of Action. ORO
90  2020 Sigma-1 receptor regulates mitophagy in dopaminergic neurons and contributes to dopaminergic protection. DA, MPTP, PD, PINK1, Sig-1R, SNc
91  2020 Simultaneous Disruption of Both Polyubiquitin Genes Affects Proteasome Function and Decreases Cellular Proliferation. DKOs
92  2020 Structural Aspects of Plant Hormone Signal Perception and Regulation by Ubiquitin Ligases. ---
93  2020 Structural basis for RING-Cys-Relay E3 ligase activity and its role in axon integrity. RCR
94  2020 Structural insights into the mechanism and inhibition of transglutaminase-induced ubiquitination by the Legionella effector MavC. ---
95  2020 Structure-Guided Mutagenesis Alters Deubiquitinating Activity and Attenuates Pathogenesis of a Murine Coronavirus. DUB, DUBmut, IFN, PLP2, WT
96  2020 Targeted modulation of E3 ligases using engineered ubiquitin variants. UbV
97  2020 The emerging nature of Ubiquitin-specific protease 7 (USP7): a new target in cancer therapy. USP7
98  2020 The GPER1/SPOP axis mediates ubiquitination-dependent degradation of ERα to inhibit the growth of breast cancer induced by oestrogen. GPER1, SPOP
99  2020 The HSV-1 ubiquitin ligase ICP0: Modifying the cellular proteome to promote infection. HSV-1, ICP0
100  2020 The KBTBD6/7-DRD2 axis regulates pituitary adenoma sensitivity to dopamine agonist treatment. CAB, DAs, KO, PA