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Abbreviation : BLAST
Long Form : Basic Local Alignment Search Tool
No. Year Title Co-occurring Abbreviation
2021 A Comparative Genomic Study of Attenuated and Virulent Strains of Babesia bigemina. ---
2021 A Genome-Wide Analysis of Antibiotic Producing Genes in Streptomyces globisporus SP6C4. RAST
2021 Beta hemolysin gene of Staphylococcus phage 3AJ_2017 genome is a suitable molecular marker for identification and characterization of pathogenic Staphylococcus aureus. ---
2021 BLAST-QC: automated analysis of BLAST results. ---
2021 Comparative Analysis of Genes Associated with Obesity in Humans Using Bioinformatic Data and Tools. ADRB3, FABP2, FTO, NCBI, PPARG
2021 Cunninghamella arunalokei a New Species of Cunninghamella from India Causing Disease in an Immunocompetent Individual. EF-1alpha, ITS
2021 Cytogenomics of Deschampsia P. Beauv. (Poaceae) Species Based on Sequence Analyses and FISH Mapping of CON/COM Satellite DNA Families. MSA
2021 Designing DNA probe from HPV 18 and 58 in the E6 region for sensing element in the development of genosensor-based gold nanoparticles. HPV, ssDNA
2021 Differentiation of Capripox Viruses by Nanopore Sequencing. CaPV, GPV, LSDV, SPV
10  2021 Engineering the precursor pool to modulate the production of pamamycins in the heterologous host S. albus J1074. ---
11  2021 Exploring existing drugs: proposing potential compounds in the treatment of COVID-19. ---
12  2021 FAD-dependent C-glycoside-metabolizing enzymes in microorganisms: Screening, characterization, and crystal structure analysis. ---
13  2021 First report of Colletotrichum fructicola causing anthracnose on cherry (Prunus avium) in China. ACT, CHS, GAPDH, ITS, PDA, TUB2
14  2021 First report of Phaeoacremonium amygdalinum associated with almond dieback and wood disease in Italy. PDA
15  2021 Genetic characteristics of HIV-1 CRF06_cpx and CRF56_cpx strains isolated in Guangzhou, China. CRFs, EFV, NFLG, NJ
16  2021 Genomic, biochemical and microbial evaluation of probiotic potentials of bacterial isolates from fermented sorghum products. LAB
17  2021 Identification and expression of adenosine deaminases acting on tRNA (ADAT) during early tail regeneration of the earthworm. A-to-I, ADAR, ADAT
18  2021 Identification of a newly emerging HIV-1 CRF111_01C comprising CRF01_AE and C in Yunnan, China: Genetic characterization and recombinant history. CRFs, HIV, NFLG
19  2021 Identification of a Novel Quinvirus in the Family Betaflexiviridae That Infects Winter Wheat. ---
20  2021 Identification of starch candidate genes using SLAF-seq and BSA strategies and development of related SNP-CAPS markers in tetraploid potato. BSA, CAPS, SLAF-seq, SNP
21  2021 Identification of the key functional genes in salt-stress tolerance of Cyanobacterium Phormidium tenue using in silico analysis. glpD, qRT-PCR
22  2021 Isolation and characterization of chitinolytic bacterium, Escherichia fergusonii AMC01 from insectivorous bat, Taphozous melanopogon. ---
23  2021 Isolation and molecular characterization of causal agent of blue mold on Allium cepa L. and its control by Pennisetum flaccidum Griseb. ITS, rDNA
24  2021 Life Cycle and Genetic Identification of Argas persicus Infesting Domestic Fowl in Khyber Pakhtunkhwa, Pakistan. 16S rRNA, PCR
25  2021 Limited Polymorphism in Plasmodium falciparum Artemisinin Resistance Kelch13-Propeller Gene Among Clinical Isolates from Bushenyi District, Uganda. AL, HRP2, PCR
26  2021 Long-read sequencing reveals the structural complexity of genomic integration of HBV DNA in hepatocellular carcinoma. HCC
27  2021 Molecular and functional analysis of naphthalene-degrading bacteria isolated from the effluents of indigenous tanneries. ---
28  2021 Molecular classification and comparative phylogeographic study of insectivorous bat species (Pipisitrellus coromandra) from Punjab, Pakistan. ---
29  2021 Phylogenetic analysis of human pegivirus from anti-hepatitis C virus IgG- positive patients. 5'UTR, HBV, HCV, HPgV-1, RT-PCR
30  2021 Predicting bacteriophage hosts based on sequences of annotated receptor-binding proteins. PR-AUC, RBP
31  2021 Using a public database of Neisseria gonorrhoeae genomes to detect mutations associated with zoliflodacin resistance. AMR
32  2021 Using Combined Methods of Genetic Mapping and Nanopore-Based Sequencing Technology to Analyze the Insertion Positions of G10evo-EPSPS and Cry1Ab/Cry2Aj Transgenes in Maize. BSA, EPSPS, GMO, SSR, TAIL-PCR
33  2021 [Determination of bovine lactoferrin in milk and dairy products by ultra performance liquid chromatography-tandem mass spectrometry]. ---
34  2021 [Simultaneous determination of three allergic proteins in rice and products by high performance liquid chromatography-tandem mass spectrometry combined with stable isotope-labeled peptides]. SDS
35  2020 A new gene inventory of the ubiquitin and ubiquitin-like conjugation pathways in Giardia intestinalis. HMMs, Ub, Ub-L
36  2020 A simple 18S rDNA approach for the identification of cultured eukaryotic microalgae with an emphasis on primers. ---
37  2020 AlgPred 2.0: an improved method for predicting allergenic proteins and mapping of IgE epitopes. IgE
38  2020 An ABA-flavonoid relationship contributes to the differences in drought resistance between different sea buckthorn subspecies. ABA, DEGs, PCR
39  2020 An integrative approach to the study of Helicotylenchus (Nematoda: Hoplolaimidae) Colombian and Brazilian populations associated with Musa crops. PCA
40  2020 AutoCloner: automatic homologue-specific primer design for full-gene cloning in polyploids. PCR, SNPs
41  2020 Bacillus aryabhattai FACU: A promising bacterial strain capable of manipulate the glyphosate herbicide residues. MSA
42  2020 Blast2Fish: a reference-based annotation web tool for transcriptome analysis of non-model teleost fish. ---
43  2020 CaPSY1 gene plays likely the key role in carotenoid metabolism of pepper (Capsicum annuum) at ripening. ABA, PSY, VIGS
44  2020 Cross-Continental Dispersal of Major HIV-1 CRF01_AE Clusters in China. HIV-1, MSM
45  2020 De novo transcriptome assembly and annotation for gene discovery in avocado, macadamia and mango. UniProtKB
46  2020 Fatty acid methyl ester analysis of Aspergillus fumigatus isolated from fruit pulps for biodiesel production using GC-MS spectrometry. ---
47  2020 Identification and Characterization of Biomarkers and Their Role in Opioid Addiction by Integrated Bioinformatics Analysis. DEGs, GO, KEGG, PPI
48  2020 Inclusion body hepatitis caused by Aviadenovirus in a tropical screech owl (Megascops choliba). TsoAd
49  2020 Isolation and molecular identification of a strain belonging to the new species Zalaria obscura from a deteriorated wooden artwork. FTIR, ITS
50  2020 Kelch 13-propeller polymorphisms in Plasmodium falciparum from Jazan region, southwest Saudi Arabia. ACT, NS, SEA, SNPs, SSA
51  2020 Molecular detection of methicillin heat-resistant Staphylococcus aureus strains in pasteurized camel milk in Saudi Arabia. MHRSA, MRSA, PAGE, PCR, S. aureus, SDS
52  2020 Origin-independent analysis links SARS-CoV-2 local genomes with COVID-19 incidence and mortality. RBD, RBM, S protein, SARS
53  2020 Prevalence and antibiotic resistance of Listeria monocytogenes in camel meat. PCR
54  2020 Rickettsia parkeri (Rickettsiales: Rickettsiaceae) detected in Amblyomma maculatum ticks collected on dogs in Tabasco, Mexico. ompB, PCR
55  2020 The YmdB protein regulates biofilm formation dependent on the repressor SinR in Bacillus cereus 0-9. ---
56  2020 Update on canine filaggrin: a review. AD, CAD, FLG, proFLG
57  2019 A Comparison of Three Different Bioinformatics Analyses of the 16S-23S rRNA Encoding Region for Bacterial Identification. NGS, OTU, rRNA
58  2019 Alignment-free approaches for predicting novel Nuclear Mitochondrial Segments (NUMTs) in the human genome. LTR, NUMTs
59  2019 Comparison of the proteome patterns of adipose-derived stem cells with those treated with selegiline using a two dimensional gel electrophoresis analysis. ADSCs, NF68, NP, PKC-eta
60  2019 Complete genome sequence and phylogenetic analysis of nosocomial pathogen Acinetobacter nosocomialis strain NCTC 8102. ---
61  2019 DNA barcoding and rapid identification of the precious herb Herba Anoectochili. ---
62  2019 Genetic Loci Associated with Salt Tolerance in Advanced Breeding Populations of Tetraploid Alfalfa Using Genome-Wide Association Studies. dw, FW, GBS, GWAS, MAS, PH, RWC, SC, SNP, SSI
63  2019 Heat resistance and presence of genes encoding staphylococcal enterotoxins evaluated by multiplex-PCR of Staphylococcus aureus isolated from pasteurized camel milk. D-value, PCR, UHTs
64  2019 High frequency and diversity of parechovirus A in a cohort of Malawian children. PeVs
65  2019 Identification of SNP loci and candidate genes related to four important fatty acid composition in Brassica napus using genome wide association study. ---
66  2019 Improving Species Identification of Ancient Mammals Based on Next-Generation Sequencing Data. ---
67  2019 In-vitro binding analysis of anti-human vascular endothelial growth factor antibodies bevacizumab and aflibercept with canine, feline, and equine vascular endothelial growth factor. VEGF
68  2019 Isolation of highly pathogenic H5N6 avian influenza virus in Southern Vietnam with genetic similarity to those infecting humans in China. HPAIVs
69  2019 Molecular Characterization of Twenty-Five Marine Cyanobacteria Isolated from Coastal Regions of Ireland. MDH, SOD
70  2019 Molecular identification of non-Cryptococcus yeasts associated with pigeon droppings in Shiraz, Southern Iran. ITS
71  2019 Molecular identification, in vivo and in vitro activities of Calvatia gigantea (macro-fungus) as an antidiabetic agent. ITS
72  2019 Molecular simulation studies on B-cell lymphoma/leukaemia 11A (BCL11A). BCL11A, DOPE, PDB
73  2019 Novel Candidates for Vaccine Development Against Mycoplasma Capricolum Subspecies Capripneumoniae (Mccp)-Current Knowledge and Future Prospects. CCPP, CPS, FPLC, MALDI-TOF, Mccp, SDS-PAGE
74  2019 Novel Sequence Discovery by Subtractive Genomics. qPCR
75  2019 Ribosomal DNA internal transcribed spacer 2 sequence analysis and phylogenetic comparison of seven cockroach species in northwestern Iran. rDNA-ITS2
76  2019 Screening and verification for proteins that interact with leucine aminopeptidase of Taenia pisiformis using a yeast two-hybrid system. DLC
77  2019 Sequence-based identification of Anopheles species in eastern Ethiopia. COI, ITS2
78  2019 The complete genomic sequence of Streptomyces spectabilis NRRL-2792 and identification of secondary metabolite biosynthetic gene clusters. antiSMASH
79  2019 Trans-Species Polymorphism in Mitochondrial Genome of Camarodont Sea Urchins. mt
80  2019 [Detection of seven kinds of aquatic product allergens in meat products and seasoning by liquid chromatography-tandem mass spectrometry]. MRM
81  2018 Age, menopausal status and the bladder microbiome. ---
82  2018 AGORA: organellar genome annotation from the amino acid and nucleotide references. AGORA, NGS
83  2018 Antennal transcriptome analysis of the chemosensory gene families in Carposina sasakii (Lepidoptera: Carposinidae). DEGs
84  2018 Assessment of three plastid DNA barcode markers for identification of Clinacanthus nutans (Acanthaceae). BOLD, MEGA, NCBI, PCR
85  2018 BlasterJS: A novel interactive JavaScript visualisation component for BLAST alignment results. ---
86  2018 BLASTmap: A Shiny-Based Application to Visualize BLAST Results as Interactive Heat Maps and a Tool to Design Gene-Specific Baits for Bespoke Target Enrichment Sequencing. ---
87  2018 Development of SNP assays for hessian fly response genes, Hfr-1 and Hfr-2, for marker-assisted selection in wheat breeding. Hfr-1, Hfr-2, SNP
88  2018 Establishment of widely applicable DNA extraction methods to identify the origins of crude drugs derived from animals using molecular techniques. EDTA, PCR, rRNA
89  2018 First detection of Anopheles stephensi Liston, 1901 (Diptera: culicidae) in Ethiopia using molecular and morphological approaches. ITS2
90  2018 First report of Euryhelmis parasites (Trematoda, Heterophyidae) in Africa: conservation implications for endemic amphibians. ---
91  2018 Genetic investigation of ocular developmental genes in 52 patients with anophthalmia/microphthalmia. PCR
92  2018 Identification of Streptococcus mitis321A vaccine antigens based on reverse vaccinology. COG, KEGG, S. mitis, TRF
93  2018 Installing, Maintaining, and Using a Local Copy of BLAST for Compute Cluster or Workstation Use. ---
94  2018 LZW-Kernel: fast kernel utilizing variable length code blocks from LZW compressors for protein sequence classification. LAK, LZW, SVMs, SW
95  2018 Massively Parallel Implementation of Sequence Alignment with Basic Local Alignment Search Tool Using Parallel Computing in Java Library. HPC, NCBI, PCJ
96  2018 Molecular Detection of Novel Genetic Variants Associated to Anaplasma ovis among Dromedary Camels in Iran. A. ovis, PCR
97  2018 Molecular Detection of TEM, SHV and CTX-M Genes Among Gram-negative Klebsiella Isolates. ESBLs
98  2018 Multiplex TaqMan real-time PCR platform for detection of Neisseria gonorrhoeae with decreased susceptibility to ceftriaxone. CRO, ESCs, MALDI-TOF MS, PBP2
99  2018 Nonspecific amplification of human DNA by Streptococcus pneumoniae LytA primer. HRMA
100  2018 Pathogenicity characteristics of Enterococcus faecium from diseased black bears. NCBI, ODC