1 |
RNA sequencing
(1523 times)
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Molecular Biology (166 times)
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DEGs (205 times) GO (107 times) KEGG (71 times)
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2009 Statistical inferences for isoform expression in RNA-Seq.
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2 |
RNA sequencing technology
(20 times)
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Medicine (5 times)
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DEGs (6 times) GO (2 times) KEGG (2 times)
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2012 Hybridization-based reconstruction of small non-coding RNA transcripts from deep sequencing data.
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3 |
RNA-sequence
(11 times)
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Medicine (3 times)
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AAV9 (1 time) AF (1 time) AFM (1 time)
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2014 Successful pod infections by Moniliophthora roreri result in differential Theobroma cacao gene expression depending on the clone's level of tolerance.
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4 |
RNA sequencing data
(5 times)
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Natural Science Disciplines (1 time)
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CGA (1 time) DA (1 time) DEGs (1 time)
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2015 Glycosyltransferase family 43 is also found in early eukaryotes and has three subfamilies in Charophycean green algae.
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5 |
RNA-sequencing analysis
(4 times)
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Biotechnology (1 time)
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CBM (1 time) GST (1 time) HPLC (1 time)
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2015 [Inhibition of replication and transcription of WSN influenza A virus by IFIT family genes].
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6 |
Recent advances in RNA sequencing
(2 times)
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Medicine (1 time)
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AS (1 time) DAS (1 time) DE (1 time)
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2013 Evaluating the impact of sequencing depth on transcriptome profiling in human adipose.
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7 |
RESULTS: Transcriptome sequencing
(2 times)
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Parasitology (2 times)
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Der p 1-like (1 time) Der p 7-like (1 time) Eur m 1-like (1 time)
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2018 Transcriptomic analysis of male and female Schistosoma mekongi adult worms.
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8 |
RNA shotgun sequencing
(2 times)
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Virology (1 time)
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HCV (1 time)
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2018 Low-Bias RNA Sequencing of the HIV-2 Genome from Blood Plasma.
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9 |
lncRNA-RNA sequencing
(1 time)
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Allergy and Immunology (1 time)
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BPA (1 time) BPS (1 time) EDC (1 time)
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2020 Identification of novel long non-coding RNAs involved in bisphenol A induced immunotoxicity in fish primary macrophages.
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10 |
Long-read nanopore transcriptome sequencing
(1 time)
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2021 Csp1, a Cold Shock Protein Homolog in Xylella fastidiosa Influences Cell Attachment, Pili Formation, and Gene Expression.
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11 |
metabolism-related nsSNVs, next-generation transcriptome sequencing
(1 time)
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Medicine (1 time)
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nsSNVs (1 time) PTCR (1 time)
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2012 RNA-Seq approach for genetic improvement of meat quality in pig and evolutionary insight into the substrate specificity of animal carbonyl reductases.
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12 |
random hexamers and the cDNA is subsequently sequenced
(1 time)
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Molecular Biology (1 time)
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smsDGE (1 time)
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2011 RNA sequencing and quantitation using the Helicos Genetic Analysis System.
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13 |
RcsB-regulated genes involved in swarmer cell differentiation, transcriptome sequencing
(1 time)
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Bacteriology (1 time)
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5'-RACE (1 time) qRT (1 time)
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2015 Regulation of the Min Cell Division Inhibition Complex by the Rcs Phosphorelay in Proteus mirabilis.
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14 |
reads present in transcriptome sequencing
(1 time)
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Virology (1 time)
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HPV18 (1 time) WXS (1 time)
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2015 HeLa nucleic acid contamination in the cancer genome atlas leads to the misidentification of human papillomavirus 18.
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15 |
reads using whole transcript sequencing
(1 time)
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Allergy and Immunology (1 time)
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S. Typhimurium (1 time)
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2010 Deep sequencing of the innate immune transcriptomic response of zebrafish embryos to Salmonella infection.
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16 |
Recent advances in next-generation sequencing technology allow high-throughput cDNA sequencing
(1 time)
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Medicine (1 time)
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DEGs (1 time)
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2014 A comparative study of techniques for differential expression analysis on RNA-Seq data.
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17 |
recent massive parallel sequencing
(1 time)
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Genetic Phenomena (1 time)
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HSD11B1 (1 time)
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2017 Analysis of Purified Pancreatic Islet Beta and Alpha Cell Transcriptomes Reveals 11beta-Hydroxysteroid Dehydrogenase (Hsd11b1) as a Novel Disallowed Gene.
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18 |
recent years, the massively parallel cDNA sequencing
(1 time)
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Medical Informatics (1 time)
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2017 DART: a fast and accurate RNA-seq mapper with a partitioning strategy.
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19 |
recently developed to perform transcriptome sequencing
(1 time)
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Science (1 time)
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---
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2014 Microfluidic single-cell whole-transcriptome sequencing.
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20 |
Recently, mRNA sequencing analysis
(1 time)
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Virology (1 time)
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HuNoV (1 time) NK (1 time) NoV GII (1 time)
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2021 Analysis of the Immune Responses in the Ileum of Gnotobiotic Pigs Infected with the Recombinant GII.p12_GII.3 Human Norovirus by mRNA Sequencing.
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21 |
Recently, next-generation sequencing techniques at the transcriptome level
(1 time)
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Medicine (1 time)
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CML (1 time) PE (1 time) SE (1 time)
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2012 FusionFinder: a software tool to identify expressed gene fusion candidates from RNA-Seq data.
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22 |
recognition test followed by PFC dissections for next-generation sequencing
(1 time)
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Molecular Biology (1 time)
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CBD (1 time) KET (1 time) PFC (1 time)
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2019 Cannabidiol Improves Cognitive Impairment and Reverses Cortical Transcriptional Changes Induced by Ketamine, in Schizophrenia-Like Model in Rats.
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23 |
reduced proliferative capacity, which we assessed by transcriptome sequencing
(1 time)
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Cell Biology (1 time)
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2015 PATZ1 Is a DNA Damage-Responsive Transcription Factor That Inhibits p53 Function.
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24 |
regulated genes detected by the using high-throughput cDNA sequencing
(1 time)
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Medicine (1 time)
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HCC (1 time)
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2020 [Establishment and gene expression analysis of drug-resistant cell lines in hepatocellular carcinoma induced by sorafenib].
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25 |
regulation, and whole-transcriptome sequencing
(1 time)
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Biology (1 time)
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lncRNAs (1 time)
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2017 Long noncoding RNA repertoire in chicken liver and adipose tissue.
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26 |
regulators by demonstrating differential allelic expression with sequencing of transcriptomes
(1 time)
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Biology (1 time)
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2010 Polymorphic cis- and trans-regulation of human gene expression.
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27 |
relapse was sequenced using a whole-transcriptome shotgun sequencing
(1 time)
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Hematologic Neoplasms (1 time)
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ALL (1 time) AS (1 time)
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2012 Application of the whole-transcriptome shotgun sequencing approach to the study of Philadelphia-positive acute lymphoblastic leukemia.
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28 |
relative abundance data obtained by Nanostring or transcriptome sequencing
(1 time)
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Allergy and Immunology (1 time)
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CF (1 time)
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2016 Use of a Multiplex Transcript Method for Analysis of Pseudomonas aeruginosa Gene Expression Profiles in the Cystic Fibrosis Lung.
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29 |
relative accuracy of microarrays and transcriptome sequencing
(1 time)
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Genetics (1 time)
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2009 Estimating accuracy of RNA-Seq and microarrays with proteomics.
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30 |
remission of EAE disease, we used Illumina deep mRNA sequencing
(1 time)
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Neuropharmacology (1 time)
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APCs (1 time) CNS (1 time) EAE (1 time)
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2016 Increase of Alternatively Activated Antigen Presenting Cells in Active Experimental Autoimmune Encephalomyelitis.
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31 |
report the high-coverage sequencing
(1 time)
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Parasitology (1 time)
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2015 Functional analysis of Girardia tigrina transcriptome seeds pipeline for anthelmintic target discovery.
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32 |
represented in the sequence sample
(1 time)
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Clinical Laboratory Techniques (1 time)
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2008 Mapping and quantifying mammalian transcriptomes by RNA-Seq.
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33 |
resequencing, transcriptional profiling
(1 time)
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Geriatrics (1 time)
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NGS (1 time)
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2009 Next-generation sequencing in aging research: emerging applications, problems, pitfalls and possible solutions.
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34 |
resistance as revealed by transcriptome sequencing
(1 time)
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Microbiology (1 time)
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RNAP (1 time)
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2014 Linking system-wide impacts of RNA polymerase mutations to the fitness cost of rifampin resistance in Pseudomonas aeruginosa.
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35 |
resistance, transcriptome sequencing
(1 time)
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Anti-Bacterial Agents (1 time)
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2018 Broad-Spectrum Adaptive Antibiotic Resistance Associated with Pseudomonas aeruginosa Mucin-Dependent Surfing Motility.
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36 |
resolution than microarrays, next-generation sequencing of mRNA
(1 time)
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Medical Informatics (1 time)
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---
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2013 Calculating sample size estimates for RNA sequencing data.
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37 |
resolution using mRNA sequencing
(1 time)
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Molecular Biology (1 time)
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ChIP-Seq (1 time) NGS (1 time)
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2017 Systems Biology Analyses in Chicken: Workflow for Transcriptome and ChIP-Seq Analyses Using the Chicken Skin Paradigm.
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38 |
response to chronic cigarette smoking using massive parallel mRNA sequencing
(1 time)
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Genetics (1 time)
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SAE (1 time)
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2012 RNA-Seq quantification of the human small airway epithelium transcriptome.
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39 |
resulting transcriptome was analyzed by deep sequencing
(1 time)
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Chemistry (1 time)
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EJC (1 time)
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2016 The Exon Junction Complex Controls the Efficient and Faithful Splicing of a Subset of Transcripts Involved in Mitotic Cell-Cycle Progression.
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40 |
results detailing targeted mRNA sequencing
(1 time)
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Environmental Exposure (1 time)
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AAF (1 time) CRE (1 time) FFPE (1 time)
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2020 Using FFPE RNA-Seq with 12 marker genes to evaluate genotoxic and non-genotoxic rat hepatocarcinogens.
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41 |
RESULTS: We used a massively parallel mRNA sequencing platform
(1 time)
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Genetics (1 time)
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AS (1 time) ID (1 time) IRESes (1 time)
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2013 Comprehensive structural annotation of Pichia pastoris transcriptome and the response to various carbon sources using deep paired-end RNA sequencing.
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42 |
rice and Burkholderia glumae, we used transcriptomics via next-generation sequencing
(1 time)
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Genetics (1 time)
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2014 Transcriptomic dissection of the rice-Burkholderia glumae interaction.
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43 |
river water as control, and high-throughput mRNA sequencing
(1 time)
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Genetics (1 time)
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ADW (1 time)
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2016 De novo assembly and analysis of changes in the protein-coding transcriptome of the freshwater shrimp Paratya australiensis (Decapoda: Atyidae) in response to acid sulfate drainage water.
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44 |
RNA depletion library preparations, followed byRNA sequencing
(1 time)
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Neoplasms (1 time)
|
DE (1 time) GS (1 time) lncRNAs (1 time)
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2018 Long Noncoding RNAs AC009014.3 and Newly Discovered XPLAID Differentiate Aggressive and Indolent Prostate Cancers.
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45 |
RNA high-throughput sequencing
(1 time)
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Toxicology (1 time)
|
miRNAs (1 time) RT (1 time)
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2021 Analysis of the microRNA and mRNA expression profile of ricin toxin-treated RAW264.7 cells reveals that miR-155-3p suppresses cell inflammation by targeting GAB2.
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46 |
RNA of laser-dissected ASM was sequenced
(1 time)
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Critical Care (1 time)
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ASM (1 time)
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2013 Glucocorticoid-induced changes in gene expression of airway smooth muscle in patients with asthma.
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47 |
RNA was extracted for dual transcriptome sequencing
(1 time)
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Microbiology (1 time)
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2021 Transcriptomic Responses to Coaggregation between Streptococcus gordonii and Streptococcus oralis.
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48 |
RNA was sequenced
(1 time)
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Genetic Phenomena (1 time)
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2017 Triportheus albus Cope, 1872 in the Blackwater, Clearwater, and Whitewater of the Amazon: A Case of Phenotypic Plasticity?
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49 |
RNA was used for high-throughput, sequencing-based transcriptomic analysis
(1 time)
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Pulmonary Medicine (1 time)
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AhR (1 time) BPD (1 time)
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2014 The genome-wide transcriptional response to neonatal hyperoxia identifies Ahr as a key regulator.
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50 |
RNA, and RNA-sequencing
(1 time)
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Medicine (1 time)
|
LAM (1 time)
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2012 A powerful method for transcriptional profiling of specific cell types in eukaryotes: laser-assisted microdissection and RNA sequencing.
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51 |
RNA-sequencing-based
(1 time)
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Chemistry (1 time)
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aCTSC (1 time) CTSCs (1 time) GO (1 time)
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2021 Transcriptional Profiling of Cardiac Cells Links Age-Dependent Changes in Acetyl-CoA Signaling to Chromatin Modifications.
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52 |
RpoE-dependent genes using transcriptome sequencing
(1 time)
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Bacteriology (1 time)
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ECF (1 time) TCSs (1 time)
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2014 Haemophilus ducreyi RpoE and CpxRA appear to play distinct yet complementary roles in regulation of envelope-related functions.
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53 |
short-read massively-parallel sequencing
(1 time)
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Neoplasms (1 time)
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HPV (1 time) OT (1 time)
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2013 Oral cavity tumors in younger patients show a poor prognosis and do not contain viral RNA.
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